Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2402 ATGGCGTCTGGATCCTCGGGTCGCGGAAACTCTGCCTCCAAAGGCTTCGATTTCGCTTCCGATGACATCCTCTGCTCCTACGACGACTACGCCAACCGCGATTCCACTTCCAACGGCAATCACACCGATCCGGATTTTCACAAATCAAGGATGGCAAGAACATCAATGTTTCCTACTACTGCTTATAATCCACCTGAAGATTCTTTAAGTCAAGATGTGATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTAATGCGGTTTCTAGAGGGAATTAGTTCAAGGCTATCACAATTGGAATTATACTGTTACAATCTTGACAAATCTATTGGAGAAATGAAATCTGATATAAATCGTGACCATGTGGAGCAAGATTCAAGGCTGAAATCTCTTGAAAAACATGTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGAGACACAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCAGCCATTCACAGTCCAATGAGGAGAGGTCGTCACCCACAACAGATCCTAAAAAAACTGACAACGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCCCTGCCTCATCAAATAGCTCCTCAGCCGCAGCCTGCCGCACCCTCAGCTCAGGCTGCTGCATCAAATGTGACTCAAGCCCCTCAACAGCCTCCTTATTACATTCCACCCACCCCTATGCCGAATTCAGCCTTGCCCCAGCACCCCCAGAATCAGTACTTACCATCCGATCAACAATATCGAACACCCCAACTTGTGGCTCCACAACCAACACCGTCTCAAGTAACCCCATCCCCACCTGTGCAACAATTTTCTCACTATCAGCAGCCACAACAACAGCAGCAGCCGCCACAGCAGCAGCAACAGCAATGGTCACAGCAGGTGCAGCCTTCACAGCCACCCCCAATGCAATCTCAAGTAAGACCCTCCTCTCCAAATGTGTACCCTCCGTACCAGCCAAATCAAGCAACAAACCCATCACCTGCAGAAACACTGCCAAACAGCATGGCCATGCAAATGCCATACTCGGGAGTTCCACCACAGGGATCTAACCGTGCCGATGCCATACCTTATGGATATGGAGGAGCTGGAAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGAGCTCTTTTCCTGCACCACCAGGTGAAATGTATGGACCTACCGGGTCCCTCCCGGCGCTTCCTCCACCGAGTAGTGCATACATGATGTATGATGGTGAGGGAGGAAGATCACATCATCCACCCCAACCTCCTCATTTTGCTCAACCTGGATATCCCCCAACAAGTGCTTCCCTTCAGAACCCCCCACAAGGGCATAACCTCATGGTCCGAAATCCGAACCAGTCACAATTCGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAACTGGTGAGCATGGGATTCAGGGGTGACCATGTTGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCGTTGATTTCAACTCAGTACTTGACAGGTTGAGCTCTGTGGGTCCTCAGAGAGGAGGATGGTCAGGGTGA 1596 0.4925 MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSTSNGNHTDPDFHKSRMARTSMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKSDINRDHVEQDSRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQIAPQPQPAAPSAQAAASNVTQAPQQPPYYIPPTPMPNSALPQHPQNQYLPSDQQYRTPQLVAPQPTPSQVTPSPPVQQFSHYQQPQQQQQPPQQQQQQWSQQVQPSQPPPMQSQVRPSSPNVYPPYQPNQATNPSPAETLPNSMAMQMPYSGVPPQGSNRADAIPYGYGGAGRTVPQQPPPQQMKSSFPAPPGEMYGPTGSLPALPPPSSAYMMYDGEGGRSHHPPQPPHFAQPGYPPTSASLQNPPQGHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAVDFNSVLDRLSSVGPQRGGWSG* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2402 531 MobiDBLite consensus disorder prediction 164 197 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 284 320 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 321 342 - -
Gso6g2402 531 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 529 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 236 250 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 217 235 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 251 275 - -
Gso6g2402 531 MobiDBLite consensus disorder prediction 343 357 - -
Gso6g2402 531 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
Gso6g2402 531 MobiDBLite consensus disorder prediction 213 408 - -
Gso6g2402 531 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 529 - -
Gso6g2402 531 Coils Coil 131 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2402 Gso-Chr6 45639254 45645095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2402 54 186 Trihelix Transcription Factor Family AT5G14540 33.835 3.31e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2402 - - gmx:100782994 875.93