Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2389 ATGGCAATATTCCATAGGTTTCTGGGGCTCTTGATTTTGATGGCTCCTATGTTGTTGCTTCATGTTGTGGCTAGGCAATTTGATGTTGGTGGCAAAGATGGGTGGGTGCTGAAGCCTACCGAAGACTACGATCACTGGGCTCAAAGAAACAGATTTCAAGTCAATGACACTCTTCATTTCAAGTACAATAAAGGGATTGATTCGGTTGTGGTGGTGAAGAAGGAGGACTTTGATTCATGCAACATCAACAACCCCATACAAAAGATGGACGGTGGTGATTCAACCTTCCAACTTTCCAATTCTGGCCTTTTTTACTTCATAAGTGGCAACCTTAACAACTGTAAAAACGGTCAAAAGCTCATTGTTCTTGTCATGGCTGTGAGGCAACCAATTCCTAAGGCTGCGCCGCCGCCGGCAAGCATCCTGCCACCGCAGAAGATTCCGGCAACCGATTTGACTTCTCCGGCACCGACACCGACGACGGACAAATCGGGTTCAGGGAGGGTTGGTGTGAGTGTGAGTGTGGGGATTGTTTTTATGTTCATTGCCTTTGTTGGGTTGGTTTAG 567 0.4674 MAIFHRFLGLLILMAPMLLLHVVARQFDVGGKDGWVLKPTEDYDHWAQRNRFQVNDTLHFKYNKGIDSVVVVKKEDFDSCNINNPIQKMDGGDSTFQLSNSGLFYFISGNLNNCKNGQKLIVLVMAVRQPIPKAAPPPASILPPQKIPATDLTSPAPTPTTDKSGSGRVGVSVSVGIVFMFIAFVGLV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2389 188 PANTHER EARLY NODULIN-LIKE PROTEIN 2 18 142 - -
Gso6g2389 188 CDD OsENODL1_like 25 125 IPR041846 -
Gso6g2389 188 PANTHER BLUE COPPER PROTEIN 18 142 IPR039391 GO:0009055
Gso6g2389 188 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Gso6g2389 188 Pfam Plastocyanin-like domain 36 118 IPR003245 GO:0009055
Gso6g2389 188 Gene3D - 23 128 IPR008972 -
Gso6g2389 188 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Gso6g2389 188 MobiDBLite consensus disorder prediction 135 167 - -
Gso6g2389 188 MobiDBLite consensus disorder prediction 151 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2389 Gso-Chr6 45478383 45479821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2389 1 184 Phytocyanin Superfamily AT4G28365 40.704 4.89e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2389 - - gmx:100803858 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0951 12 11471155 11473020 Gso6g2389 6 45478383 45479821 GST
Gso11g3121 11 47113375 47114784 Gso6g2389 6 45478383 45479821 PCT
Gso6g2389 6 45478383 45479821 Gso11g3121 11 47113375 47114784 PCT