Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2386 ATGGCTGATGGACCACAGCATCCATCAGTTGTTCAGAAGCTAGCTGGACAGTCTTACCTGGTGTCCAGGCTAAGCCCCAACTTTAACTCTGGGAATTATTCCTCGACTGTTTCTTACTTCAATGGAGGACTGCACTCTTCTGGGTTGGCTGTTGTGTCGCCTGGATCTCCAGTTACTGTGCATGCTCCAGCAGAGAAAGGAGTGAGTGGATTTCTAGTGGATTTTCTGATGGGTGGAGTGTCTGCTGCTGTGTCAAAGACAGCTGCTGCTCCAATTGAACGAGTCAAATTGCTTATCCAAAATCAGGATGAAATGATCAAAAGTGGTCGGTTATCTGAGCCATACAAGGGAATTGGTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTGATTGCTCTTTGGAGGGGCAATACTGCTAATGTTATCAGATATTTCCCTACTCAGGCTCTGAACTTTGCCTTTAAGGATTACTTCAAGAGACTTTTCAACTTTAAAAAGGACAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCATCTGGTGGGGCTGCTGGGGCTTCTTCCCTCTTATTTGTCTATTCTTTGGATTATGCCCGGACTCGTTTAGCAAACGATGCAAAGGCCGCAAAGAAGGGTGGTGAGAGGCAGTTTAATGGCTTGGTTGATGTTTACAGGAAAACCATCAAGTCTGATGGTGTTGCTGGCCTTTATCGTGGGTTCAACATATCATGTGTTGGAATTATAGTGTATCGCGGTCTTTACTTTGGAATGTATGATTCCCTGAAGCCAGTAGTTTTGGTTGGTGGGTTGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGATGGGGAATCACAATTGGTGCTGGTTTGGCTTCTTACCCCATTGACACTGTTCGTAGAAGGATGATGATGACTTCTGGAGAGGCTGTGAAGTACAAGAGCTCTTTGCATGCATTCCAAACAATCGTCGCAAATGAGGGTGCCAAGTCACTCTTCAAAGGTGCTGGTGCAAACATATTGCGTGCTGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGACAAGCTGCAGCTTGTCTTGTTCGGAAAGAAATACGGATCTGGTGGAGGTGGCTAA 1119 0.4584 MADGPQHPSVVQKLAGQSYLVSRLSPNFNSGNYSSTVSYFNGGLHSSGLAVVSPGSPVTVHAPAEKGVSGFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTIKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGGG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Gso6g2386 372 PRINTS Mitochondrial carrier protein signature 283 305 IPR002067 GO:0055085
Gso6g2386 372 Pfam Mitochondrial carrier protein 70 166 IPR018108 -
Gso6g2386 372 Pfam Mitochondrial carrier protein 275 362 IPR018108 -
Gso6g2386 372 Pfam Mitochondrial carrier protein 173 266 IPR018108 -
Gso6g2386 372 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 25 371 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 266 IPR018108 -
Gso6g2386 372 Gene3D Mitochondrial carrier domain 72 367 IPR023395 -
Gso6g2386 372 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 PRINTS Adenine nucleotide translocator signature 279 295 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso6g2386 372 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 25 371 - -
Gso6g2386 372 SUPERFAMILY Mitochondrial carrier 69 356 IPR023395 -
Gso6g2386 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Gso6g2386 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 360 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2386 Gso-Chr6 45449558 45452713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2386 3 362 Antiporters AT4G28390 82.385 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2386 K05863 - gmx:100802974 694.886