Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2385 ATGCTCAGCTACTCACCCCCGCGTTTCAGAATCGCCGCCGTCGACGCTCACCACGATCCTCTCTTACCCTTTCTCCGGTCTATCAAGAAAGCCCTAGAAGCTTCCGACGACTCCGCTTCGAGTCTCAGTAACTTACTCAAAGATTGCATCAGAAACTTCAAGAACAATGACCGCTACCGAAACGACGTCAGATTCCTCAAGATCTGGCTCCTCTATATGGGAGTTAGTGATGATTTTGATAGTGTTTTCAAAGAAATGCTGGACAGTAATGTATGTACCAATAATTCTTCACTTTATGTGTGGTCTGCAAGTTTTTTTGAGTTGAAGGGAAGATTGCATGATGCTCTCACCATCTATCAGCTTGGCATTTGCAGGAATACGGAGCCAATTGAGTGGTTGAAGAAGGCACGGACCTTATTTCTCAGTAGAATTTCTGAAATACAGAATGCTGCTTCAACTCAGAAGGTTGATGATAAAGAATCCAAGAATTTGGAAGATAATGGCATTAATCCTTGGGGCACTTCCACCATGGATAGCCTTTTAAAGAAGATATATCCTTTAATTATGAAATTTGATGGGTATCGTTCAAGCACTAAACCATACACAGGAAAAGTGGCCTTATCTACCTTGAAGAATTCATCAAGGAATAAAGTTTTAGAGATAGGTGGAATGAAGTACCATATAAAGGGCTGTGCTGGACAGGGTGGTTTTGCCCAAGTATATAAGGCTAATGTCGACAGTGATCCTGACAATGTTGTTGCACTAAAGATACAAAAACCAGCTTTCCCTTGGGAATTTTACGTTTATCGTCTGCTTGATAAGCGCATCTTAGATAGAGAGAGGTCAAGTTATGGTTTTGCTCACCGAATTCATGTCTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGTGATAAACTCATATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTATGCATTTACTACACAATAGAAATGTTACACATGGTTGAAACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCTAGGGGTGACCTTACAGAAGATGGGTTCTTGAGCCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATTTGCATCTCTTTCCAGATCACACACTATTTAAGGGAGATTGCAAAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGTAGATGCATATGGCCTTTGTGCTGTTGTCCATATGATGTTGCATAATTGCTATATGGAAGTCGTCAAAAAAGAACAATCTGATGGTAGCTACATGTATCTTCCCAAACTACCCTTTAAACGTTACTGGAACATTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCAATACCCCCATGATGATGATAGGAGTTTGCTGCAGGACCTGAAGAAGTCCTTCCAAGACTACTTGAGCTCCAATCCGCAGCTTATAAAGAAACTAAAGGAGTTACTCTCAAAGCAAAGGGCTTCCTTGTGCTCTGCTTAA 1590 0.4151 MLSYSPPRFRIAAVDAHHDPLLPFLRSIKKALEASDDSASSLSNLLKDCIRNFKNNDRYRNDVRFLKIWLLYMGVSDDFDSVFKEMLDSNVCTNNSSLYVWSASFFELKGRLHDALTIYQLGICRNTEPIEWLKKARTLFLSRISEIQNAASTQKVDDKESKNLEDNGINPWGTSTMDSLLKKIYPLIMKFDGYRSSTKPYTGKVALSTLKNSSRNKVLEIGGMKYHIKGCAGQGGFAQVYKANVDSDPDNVVALKIQKPAFPWEFYVYRLLDKRILDRERSSYGFAHRIHVYSDCSILICDYLANGTLQDVINSYVVIGKSMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDNLLIRYARGDLTEDGFLSRSGPWCDQGLCLVDWGRGIDLHLFPDHTLFKGDCKTSGFRCIEMLEDKPWKFQVDAYGLCAVVHMMLHNCYMEVVKKEQSDGSYMYLPKLPFKRYWNIELWKTFFTKMLNQYPHDDDRSLLQDLKKSFQDYLSSNPQLIKKLKELLSKQRASLCSA* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2385 529 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 147 528 IPR015661 GO:0007094
Gso6g2385 529 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 15 158 IPR015661 GO:0007094
Gso6g2385 529 PANTHER BUB1 KINASE, ISOFORM A-RELATED 147 528 - -
Gso6g2385 529 PANTHER BUB1 KINASE, ISOFORM A-RELATED 15 158 - -
Gso6g2385 529 Pfam Protein kinase domain 227 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2385 529 Gene3D Transferase(Phosphotransferase) domain 1 224 526 - -
Gso6g2385 529 SUPERFAMILY Protein kinase-like (PK-like) 225 505 IPR011009 -
Gso6g2385 529 SMART serkin_6 226 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2385 529 SMART mad3_bub1_i 10 123 IPR013212 -
Gso6g2385 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Gso6g2385 529 Gene3D - 10 163 - -
Gso6g2385 529 ProSiteProfiles BUB1 N-terminal domain profile. 1 161 IPR013212 -
Gso6g2385 529 Pfam Mad3/BUB1 homology region 1 11 123 IPR013212 -
Gso6g2385 529 ProSiteProfiles Protein kinase domain profile. 226 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2385 Gso-Chr6 45441686 45447119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2385 220 359 MAP Kinase Kinase Kinase Kinase AT3G15220 27.397 1.59e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Gso6g2385 Pkinase 1.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2385 K02178 - gmx:100802272 1082.4