Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2382 ATGACTGGCAAAGACATCCTCCATATAATGAAGGTGAAAGCAGGGTTTGCACCACCAGACACAGGGAAAGGAAAAGGCAAAATATCAAAACACATCACACATGGCTTTCACTTGATGAAGGGCAAATCGGCACATCCTATGGAAGATTATTTAGTTTCGGAATTTAAGCAAGAAAAGGATAGAGAATTAGGCTTGTTTGCAATATTTGATGGCCACTTAGGCCATGATGTTGCCAGCTATTTGCAGAACCACCTTTTCCAAAACATCTTGAAAGAGCATGACTTTTGGACTGAGACAGAAAGCGCGGTGAAGAGAGCTTACCTTGAAACAGATGAGAAAATATTGGAACAAGCACTTGTGTTGGGGCGAGGAGGGTCAACAGCTGTGACTGCAATACTTATTGATGGTCAGAAGCTTATAGTAGCAAATGTTGGTGACTCAAGAGCTGTTATTTGTGAGAATGGAAAGGCAAGACAACTATCTGTGGATCATGAACCAAGCAAGGAAAAAAAATGGATTGAGAGGCGTGGCGGGTTTGTATCAAAAATTCCAGGAGATGTCCCTCGAGTAGATGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGACAGGAGCCTGAAGATGCATCTTAGTTCAGAACCTGATGTGCTTGTAGAGGAAGTAGATCCACATACAGAGTTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACGAAGAAGCAGTGGAATCTATTCGACAAATAAAGGATGCTCAAGCTGCAGCAAAGCACTTGATAGAAGAGGCAGTTTCCAGGAAAAGCAAGGATGATATATCTTGCATAGTTGTAAGGTTCTAA 843 0.4223 MTGKDILHIMKVKAGFAPPDTGKGKGKISKHITHGFHLMKGKSAHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFQNILKEHDFWTETESAVKRAYLETDEKILEQALVLGRGGSTAVTAILIDGQKLIVANVGDSRAVICENGKARQLSVDHEPSKEKKWIERRGGFVSKIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVLVEEVDPHTEFLILASDGIWKVMSNEEAVESIRQIKDAQAAAKHLIEEAVSRKSKDDISCIVVRF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2382 280 Pfam Protein phosphatase 2C 44 273 IPR001932 -
Gso6g2382 280 CDD PP2Cc 34 280 IPR001932 -
Gso6g2382 280 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Gso6g2382 280 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Gso6g2382 280 SMART PP2C_4 22 278 IPR001932 -
Gso6g2382 280 SUPERFAMILY PP2C-like 30 280 IPR036457 -
Gso6g2382 280 Gene3D - 28 280 IPR036457 -
Gso6g2382 280 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 280 - -
Gso6g2382 280 SMART PP2C_SIG_2 38 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2382 Gso-Chr6 45410026 45412940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2382 22 280 PP2C-type Phosphatase Gene Family AT4G28400 74.903 2.36e-145 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2382 K17506 - gmx:100819846 521.931