LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso6g2367	ATGTTCGTGTTTTTTCTGCTATTCCTCTGCTTTCTCTCTCCTCTTCCGCACTCTCTCTCTCTAACCCAAGACGGTCTCTTTCTCCTCGAAGCAAGACGGCACCTTTCCGACCCGGAAAATGCCCTCTCCTCCTGGAACCCTGCCGCCACCACCCCATGCCGGTGGCGCAGCGTCACCTGCGACCCCCTCACCGGCGCCGTCACCTCCGTGAGCCTCCCCAACTTTTCTCTCTCCGGCCCCTTCCCCGCCGTCCTCTGCCGAATCGCCTCCCTGACCACCCTCAACCTCGCCTCCAACCTCATCAACTCCACCCTCTCCGCCGTAAACTTCGCCGCGTGCCGTAACCTCGTCTTCCTCGACCTCTCCCAGAACAACCTCGTGGGCCCCATCCCGGACTCTCTCGCCGGAATCGCCACTCTCCAGCACCTCGACCTCTCCGGTAATAACTTCTCCGGCGAGATTCCGGCGAGCCTCGCAGCACTCCCTTGCCTCAAGACGCTCAACCTCGTCAACAACCTCCTCACCGGAACAATACCCTCTTCACTCGGTAACCTCACTTCATTAAAACACCTTCAACTCGCTTACAACCCGTTCTCGCCGAGTCGCATACCGAGTCAACTCGGTAACCTCAGGAACCTCGAAACGCTTTTTCTCGCTGGCTGCAACCTCGTGGGCCGCATCCCTGACACTCTCAGTAACCTCTCTCACTTAACGAACATAGATTTTTCGCAGAACGGAATCACCGGTCACATTCCGCAGTGGCTCACGCGCTTGAAGCGCGTGAACCAAATAGAACTCTTCAAAAACAAACTCTCCGGGGAGTTACCCAAAGGAATGTCGAACATGACGAGTTTAAGATTCTTCGACGCGTCCACGAACGAGTTGACTGGGACGATTCCGACCGAGTTATGCGAGTTGCCACTCGCGTCGTTGAATTTATACGAGAACAAGCTCGAAGGGGTTTTGCCGCCGATTATTGCGCGTTCTCCGAACCTCTACGAACTCAAATTGTTCAGTAACAAACTTATTGGGACATTGCCGAGTGATTTGGGGAATAACTCGCCGTTGAACCACATTGATGTTTCGTTTAACCGGTTTTCCGGCAAGATTCCGGCGAACATCTGCCGGCGGGGGGAGTTTGAGGAGTTAATTTTGATGTACAATTATTTTTCCGGGAAAATTCCGGCGAGTCTTGGCGACTGCAAGAGTTTAAAGAGGGTTCGGTTGAAGAACAATAACCTCTCTGGGAGTGTTCCTGATGGGGTGTGGGGTTTGCCACATTTAAATTTGCTTGAGCTTTTGGAAAACTCTCTTTCTGGGCAAATTTCCAAGGCGATTTCGGGCGCTTACAACCTGTCAAATTTGTTGCTTTCGTATAACATGTTCTCTGGGTCGATTCCTGAGGAAATTGGGATGTTGGATAATCTTGTGGAGTTTGCTGCTAGTAATAATAATCTCTCGGGAAAGATTCCGGAGAGTGTGGTGAAGTTGAGTCAATTGGTTAATGTTGATCTTAGTTATAATCAACTCTCTGGAGAACTTAATTTTGGTGGAATTGGTGAATTGAGTAAAGTCACTGACCTTAATTTGTCACATAATATGTTTAATGGAAGTGTTCCAAGTGAATTAGCAAAATTTCCTGTGCTTAATAATCTTGATCTTTCTTGGAACAATTTTTCTGGGGAGATTCCTATGATGTTGCAGAATTTGAAGCTCACTGGGCTGAATTTGTCTTACAATCAGCTTTCTGGGGACATTCCTCCTCTTTATGCCAATGACAAGTATAAGATGAGTTTTATAGGGAATCCTGGGATATGTAATCATCTACTTGGGCTTTGTGATTGTCACGGTAAGAGTAAGAATCGGAGGTATGTGTGGATTTTGTGGTCCACGTTTGCACTTGCTGTAGTTGTGTTCATTATTGGGGTGGCATGGTTTTACTTTAGGTACAGAAAGGCGAAGAAATTGAAGAAGGGGTTAAGCGTTTCGCGGTGGAAGTCGTTTCACAAGCTCGGGTTTAGCGAGTTCGAGGTTGCTAAGTTGCTGAGCGAGGACAATGTGATAGGAAGTGGAGCTTCTGGGAAGGTGTACAAGGTGGTGCTCAGCAATGGTGAGGTTGTTGTGGCAGTGAAGAAACTGTGTGGAGCACCTATGAATGTTGATGGAAATGTTGGTGCTAGGAAAGATGAATTTGATGCTGAAGTTGAGACTCTGGGGAGGATTAGGCACAAGAATATTGTGAAGTTGTGGTGTTGTTGCAACAGTGGGGAACAAAGGCTCTTGGTTTATGAGTACATGCCAAATGGGAGTTTGGCTGATTTGTTAAAGGGTAACAAGAAGAGCTTGTTGGATTGGGTCACAAGGTATAAAATTGCTGTTGATGCTGCTGAGGGGCTTTGTTATTTGCATCATGATTGCGTCCCTCCCATTGTTCACAGGGATGTGAAATCCAACAACATATTGGTTGATGCAGAGTTTGCGGCTAAAGTTGCAGATTTTGGAGTTGCCAAAATGGTTACAGGAATCAGCCAAGGGACACGGTCAATGTCTGTGATTGCAGGATCCTATGGCTACATTGCACCAGAGTACGCGTACACTCTCCGTGTGAATGAGAAATGTGACATATATAGCTTTGGTGTGGTCCTTTTGGAGTTGGTAACTGGAAGACCCCCAATTGATCCAGAGTATGGTGAAAGTGATTTGGTCAAATGGGTTTCCTCCATGTTGGAACATGAAGGACTAGATCATGTGATTGATCCTACATTGGACTCCAAATACAGGGAAGAAATCAGCAAGGTATTGAGTGTGGGGCTTCATTGTACCAGCTCCATCCCAATAACTCGCCCCACAATGAGAAAGGTGGTTAAAATGCTTCAGGAGGTAACAACTGAAGTTCCCAAATCTAGAAGTGTAAACGGTGGAAATGTTCCATGTTCCTATGAAGGGGCATCTCATGCTATCAATGAAGTGTAG	2973	0.4743	MFVFFLLFLCFLSPLPHSLSLTQDGLFLLEARRHLSDPENALSSWNPAATTPCRWRSVTCDPLTGAVTSVSLPNFSLSGPFPAVLCRIASLTTLNLASNLINSTLSAVNFAACRNLVFLDLSQNNLVGPIPDSLAGIATLQHLDLSGNNFSGEIPASLAALPCLKTLNLVNNLLTGTIPSSLGNLTSLKHLQLAYNPFSPSRIPSQLGNLRNLETLFLAGCNLVGRIPDTLSNLSHLTNIDFSQNGITGHIPQWLTRLKRVNQIELFKNKLSGELPKGMSNMTSLRFFDASTNELTGTIPTELCELPLASLNLYENKLEGVLPPIIARSPNLYELKLFSNKLIGTLPSDLGNNSPLNHIDVSFNRFSGKIPANICRRGEFEELILMYNYFSGKIPASLGDCKSLKRVRLKNNNLSGSVPDGVWGLPHLNLLELLENSLSGQISKAISGAYNLSNLLLSYNMFSGSIPEEIGMLDNLVEFAASNNNLSGKIPESVVKLSQLVNVDLSYNQLSGELNFGGIGELSKVTDLNLSHNMFNGSVPSELAKFPVLNNLDLSWNNFSGEIPMMLQNLKLTGLNLSYNQLSGDIPPLYANDKYKMSFIGNPGICNHLLGLCDCHGKSKNRRYVWILWSTFALAVVVFIIGVAWFYFRYRKAKKLKKGLSVSRWKSFHKLGFSEFEVAKLLSEDNVIGSGASGKVYKVVLSNGEVVVAVKKLCGAPMNVDGNVGARKDEFDAEVETLGRIRHKNIVKLWCCCNSGEQRLLVYEYMPNGSLADLLKGNKKSLLDWVTRYKIAVDAAEGLCYLHHDCVPPIVHRDVKSNNILVDAEFAAKVADFGVAKMVTGISQGTRSMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVLLELVTGRPPIDPEYGESDLVKWVSSMLEHEGLDHVIDPTLDSKYREEISKVLSVGLHCTSSIPITRPTMRKVVKMLQEVTTEVPKSRSVNGGNVPCSYEGASHAINEV*	991

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso6g2367	990	Gene3D	Phosphorylase Kinase; domain 1	649	765	-	-
	Gso6g2367	990	SMART	serkin_6	682	962	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso6g2367	990	PANTHER	RECEPTOR KINASE-LIKE PROTEIN XA21	1	983	-	-
	Gso6g2367	990	ProSiteProfiles	Protein kinase domain profile.	682	962	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso6g2367	990	PANTHER	RECEPTOR-LIKE PROTEIN KINASE 5	1	983	-	-
	Gso6g2367	990	Gene3D	Transferase(Phosphotransferase) domain 1	766	976	-	-
	Gso6g2367	990	ProSiteProfiles	Leucine-rich repeat profile.	571	593	IPR001611	GO:0005515
	Gso6g2367	990	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	810	822	IPR008271	GO:0004672\|GO:0006468
	Gso6g2367	990	Pfam	Leucine rich repeat N-terminal domain	23	61	IPR013210	-
	Gso6g2367	990	Gene3D	Ribonuclease Inhibitor	20	200	IPR032675	-
	Gso6g2367	990	Gene3D	Ribonuclease Inhibitor	201	306	IPR032675	-
	Gso6g2367	990	SUPERFAMILY	L domain-like	41	371	-	-
	Gso6g2367	990	SUPERFAMILY	RNI-like	310	588	-	-
	Gso6g2367	990	Pfam	Protein kinase domain	684	956	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso6g2367	990	Gene3D	Ribonuclease Inhibitor	307	616	IPR032675	-
	Gso6g2367	990	SUPERFAMILY	Protein kinase-like (PK-like)	682	959	IPR011009	-
	Gso6g2367	990	Pfam	Leucine rich repeat	90	150	IPR001611	GO:0005515
	Gso6g2367	990	ProSitePatterns	Protein kinases ATP-binding region signature.	688	712	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso6g2367	Gso-Chr6	45221399	45225426	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso6g2367	16	961	Receptor kinase-like Gene Family	AT1G28440	59.100	0.0	1119

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Gso6g2367		Pkinase	5.8e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso6g2367	-		-	gmx:100796415	1907.88