Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2366 ATGACTCAGTGCAGTGACTCTGAAAACAATCATCATAACATCATAGTGGAGGGACGAAAAGATAGCTTAATCAGAACTTGTCCTACTTGTGGTCACCATATCAAATGCCAAGAACAGGGTGGTGGAATTCATGACTTGCCTGGACTGCCTGCTGGAGTGAAGTTTGATCCCACGGATCAAGAGATTCTTGAACATTTAGAAGCGAAGGTGCGATCTGATATTCATAAGCTTCATCCCCTAATTGATGAGTTCATTCCAACTCTTGAAGGCGAAAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATCCGGCATTTCTTTCACAGGCCTTCCAAGGCATACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACTCAGATGAAGATGGAAGTGAGACACGTTGGCACAAAACTGGTAAAACCAGGCCAGTCTACAACATTGCCAAGTTGAAAGGTTACAAGAAAATCCTTGTGCTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCACCAATACCACCTTGGCAGTGATGAAGAGGAGAAAGAAGGGGAGCTAGTGGTCTCCAAGGTTTTCTACCAAACACAACCTAGACAATGTGGTTCCCTCATGAAAGATTCATCAGTTCCTCCTGGGAAACATATGAAGGGTCAAAGTGTGCATGTTGAGGTAATGAATAATAACAAAAACAGCAACAATAATGGGTATGTTGAGTACTACCATTCTTCAAATTTCATATCTTTTGATCAAGGAGGGCAAAATGCTCAAGTAATTTCTCATTTTCCTGTCCATGAAGGTGCTCCTTTCATTCCTTGA 858 0.4207 MTQCSDSENNHHNIIVEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNIAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGSLMKDSSVPPGKHMKGQSVHVEVMNNNKNSNNNGYVEYYHSSNFISFDQGGQNAQVISHFPVHEGAPFIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2366 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 284 IPR044799 GO:0003700
Gso6g2366 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Gso6g2366 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Gso6g2366 285 MobiDBLite consensus disorder prediction 128 144 - -
Gso6g2366 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 284 - -
Gso6g2366 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Gso6g2366 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Gso6g2366 285 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2366 Gso-Chr6 45213146 45216640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2366 25 285 NAC Transcription Factor Family AT4G28500 64.130 2.46e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso6g2366 NAM 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2366 - - gmx:100795895 599.356