Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2356 ATGGCAACCCAAAGTGAAGAAAATGCTACAAAATTCCTTCAAGCTTATACCCAGATTGATGATCATAGTTTGAGATTCATACACTCCATGTCCCTTAAATGTGCAATTGACTTAAGCATACCAGACATCATACACAAGTATGGCCAACCCATGCCACTCTCACAACTCATTGCTTCACTACCAATCCACCCATCCAAGACTTGCTACATCCATCGCTTGATGCGACTCTTGACTCATTCCGGTTTCTTCTCTCGGCACGATTTGGTCGAAAACGAACAAGAAGTGATCACGTATGAGCTAACTGATGCATCTAGACTACTCCTCAAGGACCACCCTTTTAGTTTGAGGCCTTTGTTGCTAGTCACACTTGATCCAAGTGTGATTAAGTCATGGTGTCAATTCTCTACTTGGCTCACAAGTGAAGACCGTACACCGTTTCAAACGGAGAATGGGGTGACATATTTTGATTATGCTAAGCGTGACCCCAAATTCGGTCACTTTTACAATGATGCAATGGCTAAGGACACTCGATTCGCTTCTAGTGTGGTGATTGAAAACTACAAGGAAGTGTTCGAGGGATTGAAGTCAATTGTTGATGTTGGAGGAGGAATAGGGACCATGGCTAAGGCCATTGCTAAGGCATTCCCACAAGTGAAGTGCACTGTGTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAACAGAAAACATAGAATATGTCGGAGGAGACATGTTTGAAGTAATTCCTGCAGCTGATTGCATTATGCTGAAGTGGGTATTACATTGTTGGAATGACGAGGAATGCATGAAAATATTGAAGAAATGCAAGGAGGCAATACCTAGCGACGGAAAGGTTATCATCATGGAATTAGTGATGGAGCATAACAAGGAAGACAATAAATTAATTGAGATGCAGCTGTGCTGTGATATGCTTATGATGTCGCTTTTTGCAGGAAAAGATAGAACTGAGAAAGAATGGGCACATCTAATTGCCTCTGCTGGTTTCAGTAACTACAAGATAACTCATATTTTCGATTTATATCATATCATTGAGGTTTATCCCTAG 1068 0.4157 MATQSEENATKFLQAYTQIDDHSLRFIHSMSLKCAIDLSIPDIIHKYGQPMPLSQLIASLPIHPSKTCYIHRLMRLLTHSGFFSRHDLVENEQEVITYELTDASRLLLKDHPFSLRPLLLVTLDPSVIKSWCQFSTWLTSEDRTPFQTENGVTYFDYAKRDPKFGHFYNDAMAKDTRFASSVVIENYKEVFEGLKSIVDVGGGIGTMAKAIAKAFPQVKCTVFDLPHVVDGLQGTENIEYVGGDMFEVIPAADCIMLKWVLHCWNDEECMKILKKCKEAIPSDGKVIIMELVMEHNKEDNKLIEMQLCCDMLMMSLFAGKDRTEKEWAHLIASAGFSNYKITHIFDLYHIIEVYP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2356 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Gso6g2356 355 CDD AdoMet_MTases 197 289 - -
Gso6g2356 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Gso6g2356 355 PANTHER ORCINOL O-METHYLTRANSFERASE 7 355 - -
Gso6g2356 355 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Gso6g2356 355 Pfam O-methyltransferase domain 136 337 IPR001077 GO:0008171
Gso6g2356 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Gso6g2356 355 PANTHER O-METHYLTRANSFERASE 7 355 IPR016461 GO:0008168
Gso6g2356 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Gso6g2356 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gso6g2356 355 Gene3D - 1 107 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2356 Gso-Chr6 45047757 45050074 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2356 30 341 Monolignol Biosynthesis Gene Families AT5G54160 35.016 5.30e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2356 - K16040 gmx:100795012 726.857