Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2355 ATGACAGTACTAAAACTTTTACATTTTCGAAAGCATCATAGAATTTCTCTTATATTTTTTGCAAGTGATAGGGGAGCATCTCATGTTAAGCTACATTGGCCTGCTCGTTTGAAGATTGTACGAGGAATCGCACAAGGAATGCATTATCTTTACACAGTACTTGGTTCCTCGGATCTTCCACACGAGTATCTCAAGTCCATCAATGTTCTCCTTGGACCAGACAATGAACCAATGCTTGTGGATTACGGGTTCAGCCACATGGTTAACCCTTCAACCATTGCACAAACATTATTCGCTTACAAGGCACCAGACGTAGCACAACAAGGCCAAGTTTCACGCAATTGCGTTGTTTACTGTCTTGGTGTTGTGATAATTGAGATATTGATAGGGAGGTTCCCTTCTCAGTATCTCAGCAATGGAAAGGGTGGGGCTGATGTGGTGCAATGGGTGGAAACTGCAATCTCTGAGGGAAGGGAATCAGAAGTGCTTGATCCTGAGATTGCAGGCTCTAGGAATTGGCTTGGTGAGATGGAGCAACTCCTCCACATTGGTGCTACTTGCACTGAAAGCAACCCTCAGCGGCGGTTAGACATGGCGGAAGCCGTTAGAAGGATAATGGAGATTAAATTCGAGTGTGGACATGAATCAACAAGCCTTGCATATTCTCATCATGCTGAACAATCACAGAGGAGACATGGAACAAACAGCTTCGGAAGCTGGGATAATATCGAATATGGCAGCTCCTAG 747 0.4444 MTVLKLLHFRKHHRISLIFFASDRGASHVKLHWPARLKIVRGIAQGMHYLYTVLGSSDLPHEYLKSINVLLGPDNEPMLVDYGFSHMVNPSTIAQTLFAYKAPDVAQQGQVSRNCVVYCLGVVIIEILIGRFPSQYLSNGKGGADVVQWVETAISEGRESEVLDPEIAGSRNWLGEMEQLLHIGATCTESNPQRRLDMAEAVRRIMEIKFECGHESTSLAYSHHAEQSQRRHGTNSFGSWDNIEYGSS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2355 248 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 14 213 - -
Gso6g2355 248 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 213 - -
Gso6g2355 248 Gene3D Transferase(Phosphotransferase) domain 1 16 217 - -
Gso6g2355 248 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2355 248 Pfam Protein kinase domain 38 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2355 248 SUPERFAMILY Protein kinase-like (PK-like) 15 210 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2355 Gso-Chr6 45022566 45023312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2355 8 209 Receptor kinase-like Gene Family AT5G20690 48.113 1.69e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso6g2355 Pkinase 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2355 - - gmx:102669314 504.982