Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2353 ATGGCTAGTGACACTCAATGGGTTTCTAGTGTGGTAATTGAAAAGTGCAAGGGCGTGTTTGACCTATCAGAGTCATTGGTTGATGTTGGAGGAGGGACAGGGACTATGGCTAAGGCAATTGCTAAGTCATTCCCAAAACTAAAGTGTGTTGTATTTGATCTCCCACGTGTTGTTGGTGACTTGCAAGGAACTGATAACATAAAATTTGTTGGAGGAGATATGTTTGAAGAAGCATTTCCTTTGGCTGATTGCATTACGTTGAAGTGGGTATTACATAATTGGAACGACGAGGATTGTGTGAAATTACTGAATAAATGCAAGGAGGCAATACCTAACCACGGTGGGGTTATTATCATAGAGGTTTAG 366 0.4098 MASDTQWVSSVVIEKCKGVFDLSESLVDVGGGTGTMAKAIAKSFPKLKCVVFDLPRVVGDLQGTDNIKFVGGDMFEEAFPLADCITLKWVLHNWNDEDCVKLLNKCKEAIPNHGGVIIIEV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2353 121 PANTHER O-METHYLTRANSFERASE 1 121 IPR016461 GO:0008168
Gso6g2353 121 PANTHER ORCINOL O-METHYLTRANSFERASE 1 121 - -
Gso6g2353 121 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 120 IPR029063 -
Gso6g2353 121 CDD AdoMet_MTases 26 121 - -
Gso6g2353 121 Pfam O-methyltransferase domain 2 120 IPR001077 GO:0008171
Gso6g2353 121 Gene3D Vaccinia Virus protein VP39 1 121 IPR029063 -
Gso6g2353 121 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 121 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2353 Gso-Chr6 44991473 44992723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2353 1 120 Monolignol Biosynthesis Gene Families AT5G54160 43.333 8.99e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2353 - K16040 gmx:102669052 252.292