Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2352 ATGGAATTTGATAATGAAGACCATTATGCAAAACTACTTCGAGCTCAAACCCACATATTTGATCAAACTTTCGGATTCATAAACTCTATGTCCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTAATACACAAGTATGGCCAACCTATGCCACTCTCTCAACTCATTGCTTCACTTCCAATTCACCCTTCTAAGGCTTGCTTCATTTTCCGCTTGATGCAAATTTTGACTCATTCCGGTTTCTTCTCTCAACACAATAATGCCACCGAAAATTATGAGCAAGAAGAAGTGAGTTATGTGCTAACTGATGCATCTAAACTACTCCTTAAGGACCATCACTTTAGTATGATTTCCTTGCCACAAGTCATACTTGATCCAATTTTGGTGAATCCATGGTTTCAATTCTCTACCTGGTTCACAAATGAAGACCCTACACCGTTTCACACACAAAATGGGATGGCATTTTGGGATTATGCTAGCTCTGAGCCCAAACTCAACCACCTTTTTAATGATGCCATGACTAATGACTCACGGTTGATTTCCAGCGTGTTGATTGAGAAGTGCAAGGGAGTGTTTAGTGGATTGGAGTCTTTGGTTGATGTTGGGGGTGGAACTGGGACTATGGCTAAGGCCATTGCCAAGTCGTTTCCTCAATTGAAGTGTATTGTGTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAACAGAGAACGTAGAATATGTTCATGGGGACATGTTTGAAGCAATTCCTTCTGCTGATTCCATTATGTTGAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGCAAACAAAGATAAAGGAAAGGTGATTATCATAGACGTGGTGATAGGAAACGAGAAAGGAGACAGTGAATTAGATCAAACAAAGCTCTTCTATGATATTGAGATGATGGTGTTAGTCACTGGGAAAGAGAGAAATGAGAAAGACTGGGCTAAATTGTTTTTGTCTGCAGGTTTCAATAGCTACAAGATAACTCCAGTTCTAGGTTTTAAGTCTCTAATCGAGGTTTATCCATAG 1080 0.3981 MEFDNEDHYAKLLRAQTHIFDQTFGFINSMSLKCAIDLCIPDVIHKYGQPMPLSQLIASLPIHPSKACFIFRLMQILTHSGFFSQHNNATENYEQEEVSYVLTDASKLLLKDHHFSMISLPQVILDPILVNPWFQFSTWFTNEDPTPFHTQNGMAFWDYASSEPKLNHLFNDAMTNDSRLISSVLIEKCKGVFSGLESLVDVGGGTGTMAKAIAKSFPQLKCIVFDLPHVVDGLQGTENVEYVHGDMFEAIPSADSIMLKTIMHNWNDEECLKILKRCKEAIANKDKGKVIIIDVVIGNEKGDSELDQTKLFYDIEMMVLVTGKERNEKDWAKLFLSAGFNSYKITPVLGFKSLIEVYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2352 359 CDD AdoMet_MTases 199 297 - -
Gso6g2352 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 358 IPR029063 -
Gso6g2352 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Gso6g2352 359 PANTHER ORCINOL O-METHYLTRANSFERASE 5 359 - -
Gso6g2352 359 PANTHER O-METHYLTRANSFERASE 5 359 IPR016461 GO:0008168
Gso6g2352 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Gso6g2352 359 Gene3D - 3 109 IPR036388 -
Gso6g2352 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
Gso6g2352 359 Pfam O-methyltransferase domain 133 341 IPR001077 GO:0008171
Gso6g2352 359 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gso6g2352 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2352 Gso-Chr6 44984813 44986760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2352 30 345 Monolignol Biosynthesis Gene Families AT5G54160 33.645 3.32e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2352 - K16040 gmx:100793263 728.013