Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2349 ATGATGAGAGAAAGTTTCAAGGGCAAGGGTGGATCTTCTTCTCTTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGAGAAGATTCAAGGGATTTTCAACAGTCTTCAGTGTGCAAGAAAGGAGGGCAGGGGTAATGACATTGTGATATTTGAGGAGCAGATGCATCAGTTGCTCCGAGAGTGGAAGGCGGAACTGGAGTCTCCGGCCAACTCCTTAGCTGATGGAAGCTTTGGTTCATTTCCCAGCGAACTAGCCCAAATGTTGCTAGGAACTGAGGAGAAAGATGATGCTACTAGTCCATTGACAAAACCTGTGCCATTGAAGAATGAGATCCTTACAAATAACATTAGTGACATCAATTTTCAGTATTTTCAGGAGAAGCATTTTAATGATAACCAACCACTAGGTCATACTTTTGAAGGAAGTGCTTCAACTCTGTACAACAATGCTTATAATAGCTCAGATATGACACAGTTAGATTATCACCCATTCACTTTAAATCAAGATATGGGTCACAACTCTAATTTGTTGGGTCAGTTTGATTTATATCATGACCTCAGGCACAACACGGAAATGAAGAACAACTCAGAATCAACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAATTCTTTGAAGCTGATGACAATGTGCAGCATGGAGAGAATATTATACCTAACATTCTTCCAAATATCTGCCCCCCACCTTCTGCTTTCTTAGCCCCAAAATGTGCCCTATGGGACTGTTTCAGACCTGCTCAAGGGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGTCATGAGCTGTTGGCAAATAACGAGGGTCTTCCTGGCATGACCCCAATTTTGCGACCTTGGGGAATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACGCAGGGAAAGGAAGTGGGCATCCCTAGTTGTGAAGGTGCTGCTTCAACTAAATCCCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAATAGAAAACAGAGATCACTTCCGGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTAATGAAGGAACATGGGGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTCGAGTGGCATTTGTACGAGTATGAGATCAACAACCAGGATGGTTGTGCATTATACAGACTAGAATTAAAGCTGGTGGACAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTACTGATTTGCAGAACAAGATGGGACAGCTTACTGCTGCTGTTCCATCTACTGATGATGGACAACCAGTCAAGGGAAAAACAAAGGCCAAGTCTGAGAATGATGAATCTCCCAACAAGTAA 1437 0.4287 MMRESFKGKGGSSSLQSMKEKEKHLVEKIQGIFNSLQCARKEGRGNDIVIFEEQMHQLLREWKAELESPANSLADGSFGSFPSELAQMLLGTEEKDDATSPLTKPVPLKNEILTNNISDINFQYFQEKHFNDNQPLGHTFEGSASTLYNNAYNSSDMTQLDYHPFTLNQDMGHNSNLLGQFDLYHDLRHNTEMKNNSESTQFSLEGFDCSQFFEADDNVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPWGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNQDGCALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGQLTAAVPSTDDGQPVKGKTKAKSENDESPNK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2349 478 MobiDBLite consensus disorder prediction 430 478 - -
Gso6g2349 478 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g2349 478 PANTHER TRANSCRIPTION FACTOR VOZ1 2 473 IPR039277 GO:0006355|GO:0048578
Gso6g2349 478 MobiDBLite consensus disorder prediction 462 478 - -
Gso6g2349 478 MobiDBLite consensus disorder prediction 365 387 - -
Gso6g2349 478 PANTHER TRANSCRIPTION FACTOR VOZ2 2 473 - -
Gso6g2349 478 MobiDBLite consensus disorder prediction 356 387 - -
Gso6g2349 478 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2349 Gso-Chr6 44956498 44961226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2349 12 454 VOZ-9 Transcription Factor Family AT1G28520 53.229 6.74e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Gso6g2349 None None None