Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2322 ATGGGTTTTCGTTTGCCTGGTATCAGAAAGGCATCATTTTCTGCAAACCAAGCATCTTCAAAAGCCGTGGATGTGGAAAAGGGCTACCTTGCAGTCTATGTCGGAGAGAAAATGAGGCGGTTTGTGATCCCCGTATCTTACTTGAACAAACCCTCATTCCAGGACTTGTTAAGTCAGGCTGAGGAAGAGTTTGGATATCATCATCCCAACGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACATATAACTTCTTTCTTGAATTAA 273 0.4359 MGFRLPGIRKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2322 90 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Gso6g2322 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Gso6g2322 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2322 Gso-Chr6 44486138 44486884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2322 14 85 Calmodulin-binding Proteins AT3G43120 47.222 6.77e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2322 K14488 - gmx:113001961 185.267