Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2319 ATGGGTTTTCGCTTACCTGGCATCAGGAAGACATCAATTGCTGCAAACCAAGCATCTTCCAAATCTGTGGAGGTGCCAAAGGGCTACCTTGTTGTCTATGTTGGAGACAAAATGAGGCGGTTTGTGATCCCCGTATCATACTTGAACCAACCATCCTTTCAAGATTTGTTGAATCAAGCTGAGGAAGAATTCGGGTATGACCATCCAATGGGCGGTCTAACAATACCATGCAAGGAGGATGAGTTCCTAACCGTCACCTCTCACTTGAATGACCTGTAA 279 0.4552 MGFRLPGIRKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFVIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLNDL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2319 92 Pfam Auxin responsive protein 13 87 IPR003676 GO:0009733
Gso6g2319 92 PANTHER AUXIN-INDUCED PROTEIN X10A 1 91 - -
Gso6g2319 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2319 Gso-Chr6 44465888 44466549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2319 10 82 Calmodulin-binding Proteins AT3G43120 48.052 5.33e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2319 K14488 - gmx:100777479 187.963