Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2317 ATGGGTTTTCGTTTAACTGGCATCAGAAAGGCATCAAAAGCGGCGGACGCACCAAAAGGCTATCTTGCATTCTATGTCGGAGAGAAATTGAAGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTCCAGGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATTGA 249 0.4418 MGFRLTGIRKASKAADAPKGYLAFYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCLN* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2317 82 PANTHER AUXIN-INDUCED PROTEIN 15A 5 82 - -
Gso6g2317 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 82 IPR003676 GO:0009733
Gso6g2317 82 Pfam Auxin responsive protein 11 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2317 Gso-Chr6 44450213 44450647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2317 16 81 Calmodulin-binding Proteins AT3G43120 51.515 2.60e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2317 K14488 - gmx:113001963 167.548