Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2316 ATGGGTTTTCGTTTGCCTGGTATCAGAAAGGCATCAGTTTCTGCAAAGCAAGCATCTTCGAAAGCTGTGGATGTGGAAAAGGGCTACCTTGCAGTCTATGTCGGAGAGAAAATGAGGCGGTTTGTGATCCCCATATCTTACTTGAACAAACCCTCATTCCAGGACTTGTTAAGTCAGGCTGAGGAAGAGTTTGGATATCATCATCCCAACGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACATATAACTTCTTTCTTGAATTAA 273 0.4359 MGFRLPGIRKASVSAKQASSKAVDVEKGYLAVYVGEKMRRFVIPISYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2316 90 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Gso6g2316 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Gso6g2316 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2316 Gso-Chr6 44445517 44446015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2316 17 85 Calmodulin-binding Proteins AT3G43120 49.275 7.62e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2316 K14488 - gmx:113001953 177.178