Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2315 ATGGGTTTTCGTTTACCTGGCATCACAAAGGCATCAAAAGCAGTGGACGCACCTAAAGGCTATCTTGCAGTCTATGTCGGAGAGAAATTGAAGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTTCAGGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATTGA 249 0.4378 MGFRLPGITKASKAVDAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCLN* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2315 82 Pfam Auxin responsive protein 12 81 IPR003676 GO:0009733
Gso6g2315 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 82 IPR003676 GO:0009733
Gso6g2315 82 PANTHER AUXIN-INDUCED PROTEIN 15A 8 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2315 Gso-Chr6 44443957 44444552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2315 16 81 Calmodulin-binding Proteins AT3G43120 53.030 5.85e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2315 K14488 - gmx:100776943 166.392