Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2314 ATGCCTGAACAAACATTAGGTTGTCAGGTGGGTAATTTGGTGGCCACTAACTCAGAAGGTGAGAAAATAATGGGTTTTCGCATAGCAGGTATTGTTAGGCGGACTTCGTTTTATACAACCCAAGCAGCCTCCAAGAGGGTTGACGTACCAAAAGGCTATGCTGCAGTCTATGTTGGAGATAAGATGAGACGGTTCACAATTCCAGTATCATACTTGAACAAACCTTCATTTCAAGAATTACTCAGTCAAGCAGAAGAAGAATTCGGATACGATCATCCAATGGGTGGTCTAACAATACCATGCAAAGAAGAGGAATTCCTAAACGTTACCGCTCACTTGAATGAGCTGTAA 351 0.4217 MPEQTLGCQVGNLVATNSEGEKIMGFRIAGIVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNKPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNEL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2314 116 PANTHER AUXIN-INDUCED PROTEIN 10A5 24 115 - -
Gso6g2314 116 Pfam Auxin responsive protein 35 111 IPR003676 GO:0009733
Gso6g2314 116 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 24 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2314 Gso-Chr6 44435340 44435951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2314 39 106 Calmodulin-binding Proteins AT3G43120 54.412 1.31e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2314 K14488 - gmx:100814912 233.032