Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2313 ATGGGTTTTCGTTTACCTGGCATCAGAAAGGCATCAAAAGCGGCGGACGCACCAAAAGGCTATCTTGCAGTCTATGTCGGAGAGAAATTGAAGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCTTCATTCCAGAACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATTGA 249 0.4458 MGFRLPGIRKASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQNLLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCLN* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2313 82 PANTHER AUXIN-INDUCED PROTEIN 15A 7 82 - -
Gso6g2313 82 Pfam Auxin responsive protein 11 81 IPR003676 GO:0009733
Gso6g2313 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2313 Gso-Chr6 44432229 44432752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2313 16 81 Calmodulin-binding Proteins AT3G43120 53.030 3.76e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2313 K14488 - gmx:100815438 168.318