Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2301 ATGCGTCCACCGCGTAAGAGGGTGGATTTCGCGCGCGACGACAAGGTGGAGATCTGCGGCAACGAGGATGGCTTCCTCGGCTCCTACTACCAAGCCACGGTCGTGTCGCGCCTCGACAACGGCCTCTACGTCGTACGCTACGACACGCTCCTCGAAGACGACGCATCACAACAACCCCTTACCGAAACCCTTTTCCCCAAAGAACTCCGTCCCCAGCCGCCACGTGTCTCCAAAACCGATTTCGCGCTCTACCAGTGCGTCGACGCCTTCGACAACGACGGCTGGTGGCTCGGCCAGGTCACCGGAAAAAAAGACGCCGAGCATTACTACGTGTATTTTTCTACCACTAATGAGGAGATTGCGTATCATGTTTCTGCGATTAGGGTTCATCATGAGTGGAGCCATGGGGAGTGGGTTTTGTCCAATTGA 429 0.5618 MRPPRKRVDFARDDKVEICGNEDGFLGSYYQATVVSRLDNGLYVVRYDTLLEDDASQQPLTETLFPKELRPQPPRVSKTDFALYQCVDAFDNDGWWLGQVTGKKDAEHYYVYFSTTNEEIAYHVSAIRVHHEWSHGEWVLSN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2301 142 PANTHER - 7 140 - -
Gso6g2301 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Gso6g2301 142 SMART agenet_At_2 8 77 IPR014002 -
Gso6g2301 142 SMART agenet_At_2 79 135 IPR014002 -
Gso6g2301 142 Pfam Agenet domain 13 74 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2301 Gso-Chr6 44355361 44356207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2301 22 136 PHD Transcription Factor Family AT5G58610 30.882 1.85e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2301 - - gmx:121175082 304.293