Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2253 ATGAAGAATTTTACCTACTTGAGCCAAAAACAACATCGTTTTTGTAGTTTTTTCCCACACAGCCTTGGATTCTTTGTCCATTTTCTAGCCTTCCATGTCCACCCCTTCTTCGTTCAACTTTGTTATTTCGTGATCCTTTCTCTGCTTGGTTACCTAGGTCTCAAGGTCTCAAAGCCTAGAACCCCCGTTAGACCAAACGACTTGGACCTCTTTTACACTTCTGTTTCTGCTTCCACAGTTTCAAGCATGGTAGCTGTTGAAATGGAGGTTTTCTCCAATTCTCAACTAATTCTCCTCACCCTTCTCATGTTTGTTGGTGGCGAAGTTTTCACTTCCGTGCTCGACCTTATATTTGCTAGGTATAAATTCACCCAAAGTGTCCAAAATAAAGTTCCCACCCATCATTCATATCAGACTCAATCAGAATTTTCTCCAGTGGAACATATATGTGGTTTAGACAAAAATAACGATAACACCAATCCTTTTTCACCCACAAAGAAGCCCCCAATTAATGCCAATCAAATTGAACTTGGTTTAGTTTCTATTCATCACTCAGAATCAGAAAACCACAAACCAAGTGATAGTAAACTTCCTGATACATATCTTCAATTCCTACAGATAAAAAAAACTAAAAGTAATATTAACGTTCCAAAGGGCACGGTAGAGTCCTTTAACGACAGTGATAGACTTAAGTATAACTGTCTTAGTTTCCTGACTTTTGTAGTTTTAGGTTACCTTGTTGTGGTTCAATTTGTTGGCTTTAGTTTTGTGTCTTTGTACATAACTTTGGTACCAAGTGCAAGACAAGTACTGAAAAACAAAGGCATAAAGATTGCAACGTTTTCCTTGTTTACCATAGTTTCCACGTTTGCTAGTTGTGGTTTCATCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCAGGGCTTCTTCTCCTGGTCCTCCCACACATCCTTCTAGGTAACACCCTTTACCCACCGTGCTTGAGGCTTGTAATAATGGCTCTGAAAAGGGTCACCAGAAGAGAGGAATACTCGCACTTGCTGAAGAATTTCAAAGACGTGGGGTATGATCACATGCTTTCTGCTCTTCATTGTTGCCTCCTGGTTGCAACTGTGTTGGGTTTCAATCTTGTTCAGTTTGTGATGTTTTGCTCTGTGGAGTGGAACACCAAAATCATGGAGGGTTTGAATGTGTATGAGAAAGTGGTGGCGTCGTTGTTTCAAGTCACAAACGCGAGACACTCTGGTGAATCTGTCTTTGATCTCTCCTCCATATCTTCAGCCATATTGGTACTCTTCGTTGTCATGATGTACCTCCCACCATACACAACATTTTTACCAGTAAGAGAGCACGAAAATGATGTGAAGAGAAACGAAAAAAGCGTAGTGGAGTGTCTTGTATTCTCTCAACTCTCTTACTTGGTCATTTTCATTATTTTGATTTGCATCACTGAGAGCAACAGCTTAAAAGAGGATCCCCTCAACTTTAATGTGTTGAACATCACCCTAGAAGTCATCAGTGCTTATGGGAACGTAGGGTTGTCAATGGGATACAGCTGTGCTAGGCAATTGAAACCTGATGCGACGTGCAAAGATTCATGGGTTGGATTCTCCGGAAGGTGGAGTAGCAAAGGCAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGACTCAAGAAATTTAACATGAAAGGTGGCAAAGCCTGGAACCTCTCCTAG 1725 0.4087 MKNFTYLSQKQHRFCSFFPHSLGFFVHFLAFHVHPFFVQLCYFVILSLLGYLGLKVSKPRTPVRPNDLDLFYTSVSASTVSSMVAVEMEVFSNSQLILLTLLMFVGGEVFTSVLDLIFARYKFTQSVQNKVPTHHSYQTQSEFSPVEHICGLDKNNDNTNPFSPTKKPPINANQIELGLVSIHHSESENHKPSDSKLPDTYLQFLQIKKTKSNINVPKGTVESFNDSDRLKYNCLSFLTFVVLGYLVVVQFVGFSFVSLYITLVPSARQVLKNKGIKIATFSLFTIVSTFASCGFIPTNENMMVFKKNSGLLLLVLPHILLGNTLYPPCLRLVIMALKRVTRREEYSHLLKNFKDVGYDHMLSALHCCLLVATVLGFNLVQFVMFCSVEWNTKIMEGLNVYEKVVASLFQVTNARHSGESVFDLSSISSAILVLFVVMMYLPPYTTFLPVREHENDVKRNEKSVVECLVFSQLSYLVIFIILICITESNSLKEDPLNFNVLNITLEVISAYGNVGLSMGYSCARQLKPDATCKDSWVGFSGRWSSKGKFILILVMFFGRLKKFNMKGGKAWNLS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2253 574 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 1 574 - -
Gso6g2253 574 Pfam Cation transport protein 469 528 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gso6g2253 574 Pfam Cation transport protein 228 441 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gso6g2253 574 PANTHER SODIUM TRANSPORTER HKT1 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2253 Gso-Chr6 43550949 43556853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2253 241 573 Inorganic Solute Cotransporters AT4G10310 53.509 2.54e-127 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2253 K24976 - gmx:100797835 1105.89