Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2236 ATGTCTGAATTAGACGATCAAATTCCTACTGCCTTCGATCCTTTTGCTGATGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGTGTACAGCAGCGAAATGGTAGGAAAAGCCTGACAACCGTTCAGGGATTGAAAAAGGAATTCAGCTATAACAAGATACTTAAAGACGTCAAGAAAGAGTTCTGTTGCAATGGAACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACCTTCCTAGTCCAGGCTGGTATCGTGAAGAAGGATCATATCAAGATTCATGGTTTCTGA 342 0.424 MSELDDQIPTAFDPFADANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2236 113 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g2236 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Gso6g2236 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Gso6g2236 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Gso6g2236 113 Gene3D - 2 113 - -
Gso6g2236 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Gso6g2236 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Gso6g2236 113 PANTHER BNAA03G48450D PROTEIN 1 113 - -
Gso6g2236 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Gso6g2236 113 SUPERFAMILY eIF1-like 6 113 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2236 Gso-Chr6 43245584 43247982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2236 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 91.150 6.19e-76 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2236 K03113 - gmx:100499833 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2236 6 43245584 43247982 Gso6g2236 6 43245584 43247982 ECH