Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2235 ATGTCTGGATTAGACGATCAAATTCCTACTGCCTTCGATCCTTTTGCTGATGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTTCAGCAGCGAAATGGTAGGAAAAGCCTGACAACCGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAGTTCTGTTGCAATGGAACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACTTTCCTAGTACAGGCTGGTATCGTGAAGAAGGATCATATCAAGATTCATGGTTTCTGA 342 0.4181 MSGLDDQIPTAFDPFADANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2235 113 MobiDBLite consensus disorder prediction 1 25 - -
Gso6g2235 113 PIRSF Transl_init_SUI1_Euk 2 113 IPR005874 GO:0003743
Gso6g2235 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Gso6g2235 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Gso6g2235 113 Gene3D - 4 113 - -
Gso6g2235 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Gso6g2235 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Gso6g2235 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Gso6g2235 113 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG ISOFORM X1 1 113 - -
Gso6g2235 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2235 Gso-Chr6 43238080 43240752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2235 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 90.265 1.04e-74 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2235 K03113 - gmx:100791863 214.157