Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2212 ATGTTGAGGATTCAAAATTTTGAGGGTGATGTGCTCTTCCTAGACAACAAAGAGCAAAGAGTTGGAGCAGAAACAATGGTGGGGACTCCAATTAATGGAAGAACCAGGCAAGCTTTCACAGTTGTCAATGGCGGTGGCCACGATCTTTGCCCCAGTAGTACTCCTCCAAGCAATGCTGGATCGGACTATGGTGTCATAGAGTTCACCAGAGAGGATGTGGAGGCATTGCTAAATGAAAAAGCCAAGAGAAAGGACAGATTTAATTATAAGGAACGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAGAAGTTAAAGAATTCACTGGAAATGACCCAGAAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATCACAGAAATGAGAAGGAATTGCACTTCCTTACAAGAAAAATTGATCAAGGAAGAAATGGAAAAGTCGGCTGCAGTGGAGTCTCTTGTTAAAGAGAGAGAAGCTAGGCTTGACATTGAGAGGTCACATAGTACTCTGTCAGAGGACCTTGGAAGAGCACAACGAGAGATGCAAAGTGCAAATCAGAAGATAGCATCACTCAATGAAATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAGTACAATGGAAAACTTCACTCTGAGCTTTCGTCGGTTGAGGATGAACTTAAACGCGTAGAAAAGGAGAAGGTTTCGGTAGTGGAGAACATCACCTTGTTAAGGGGTCAACTTACTGTATCCGTTTCTTCTCAAGAGGAGGCCATAAAACAGAAGGATGTCTTGGCTACAGAAGTTTCCTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGATGAGCGAGACCGGCAATTATCTCAAGTACAAATTTTAAGTTCTGAATTAGAGAAAGTTAAAGAATCTACAAAACATTCCTCCACTGAATTGGACAGCTTGACGTTTAAAGCTAATGATCTGGAGGAAAAATGTTCTCTGAAAGATAATCAAATAAAGGCATTGGAAGAGCAGCTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCTGCATATGAGACAAGGACAGAATATGAGGGACAACAGATATTTGTGAATGAGTTACAAAGACGCTTAGCAGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAATTAAAAGGGAACATTCGTGTATTTTGTCGTGTGAGGCCTTTATTAGCTGATGAAAGTTGTAGCACAGAAGGCAGGATTTTCAGTTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTAGCCCAAAATGGCCAAAAACATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTGGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTACAAGGTTTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAGACCTATACAATGATGGGAAGGCCTGGACATCCAGAGGAGAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACTAAGCAGTCTCAGCAACCTCAGGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAATGATCCGTGATCTGATATCTACAACAACACGTGTGGAAAATGGTACTCCTGGAAAACAATATACAATCAAACATGACGTAAATGGAAATACACAAGTTTCTGATCTCACAGTAGTGGATGTTCATAGTGCTAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAACCTTATTGATCTTGCTGGTAGCGAGCGGCTTTCAAAGAGTGGATCAACTGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCACTGAGTGATGTTATATTTGCCTTAGCCAAGAAGGAGGACCATGTGCCATTCAGAAACTCAAAGCTTACATATCTGCTTCAGCCTTGTCTAGGTGGAGACTCCAAGACACTAATGTTTGTGAACATATCACCTGATCCTTCTTCAGTTGGTGAATCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTAGGCGTCAAACCAATGGACGTTCAATAGAGTCTCGCTTGAGCTATTTCTAA 2343 0.4016 MLRIQNFEGDVLFLDNKEQRVGAETMVGTPINGRTRQAFTVVNGGGHDLCPSSTPPSNAGSDYGVIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLEMTQKKCIEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEEMEKSAAVESLVKEREARLDIERSHSTLSEDLGRAQREMQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKVSVVENITLLRGQLTVSVSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQILSSELEKVKESTKHSSTELDSLTFKANDLEEKCSLKDNQIKALEEQLATAEKKLQVSDISAYETRTEYEGQQIFVNELQRRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLADESCSTEGRIFSYPTSMETSGRAIDLAQNGQKHAFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNEMIRDLISTTTRVENGTPGKQYTIKHDVNGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2212 780 Gene3D Kinesin motor domain 373 761 IPR036961 -
Gso6g2212 780 Coils Coil 391 411 - -
Gso6g2212 780 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 779 - -
Gso6g2212 780 Coils Coil 237 264 - -
Gso6g2212 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 757 IPR027417 -
Gso6g2212 780 SMART kinesin_4 423 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 Coils Coil 146 173 - -
Gso6g2212 780 PANTHER KINESIN-LIKE PROTEIN 25 779 - -
Gso6g2212 780 PRINTS Kinesin heavy chain signature 501 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 PRINTS Kinesin heavy chain signature 629 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 PRINTS Kinesin heavy chain signature 660 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 PRINTS Kinesin heavy chain signature 709 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 SUPERFAMILY Bacterial hemolysins 109 361 - -
Gso6g2212 780 ProSiteProfiles Kinesin motor domain profile. 425 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 CDD KISc_C_terminal 423 761 - -
Gso6g2212 780 Pfam Kinesin motor domain 431 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g2212 780 ProSitePatterns Kinesin motor domain signature. 659 670 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso6g2212 780 Coils Coil 66 86 - -
Gso6g2212 780 Coils Coil 286 320 - -
Gso6g2212 780 Coils Coil 342 376 - -
Gso6g2212 780 Coils Coil 195 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2212 Gso-Chr6 42769113 42775251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2212 397 773 Calmodulin-binding Proteins AT5G65930 38.727 4.28e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2212 K10405 - gmx:100788335 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2212 6 42769113 42775251 Gso6g2212 6 42769113 42775251 ECH
Gso12g1132 12 16059679 16065934 Gso6g2212 6 42769113 42775251 GST
Gso12g1818 12 41876678 41883166 Gso6g2212 6 42769113 42775251 PCT
Gso11g3045 11 46313685 46320007 Gso6g2212 6 42769113 42775251 PCT
Gso6g2212 6 42769113 42775251 Gso12g1818 12 41876678 41883166 PCT
Gso6g2212 6 42769113 42775251 Gso11g3045 11 46313685 46320007 PCT