Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2211 ATGGGAATTCAAAAACATATGGTTAACATAAAGGTTACTTTTGGGGTTCTTTCGGTTCTTCTTCTTGTGGCAGCAGTCAGTTCTATAGAAAAGAAGGAAGCAGAGAATGATTTTGTTAGGGAGTTACTTGATCCAGCATCTGGATTGTTAGATGAGCACACGGAATTGTCTGGCAGCACCAATATAATCAGTTCAGAGATTCAACCAATAGAACAGGAAGAAATACAAAAATTTATCAGTTCTTACTGTCCACAATTCCTGGGGAACTTTCTTCACTGTTTGAGAAAAAATAATCATCCATTACCTGTCTCAGGAAAAGAAGATGATTCCAAGATTTGGCATGTCACTTATATGGGACCACTTTTTTCCCGTTCCAGTGATCCTGAAAGAAAATTTGGTCGTATTTTGCTCCAACACATATCAGAACCACCTAGTCCAGGTCCTGCAGTTGGATCACCTACACACAGTTTAGCGCCATCTCCTGAATCCAGTCTAGCACCATCATCTGAACCCAGTCTGGCCCCATCATCTGAACCCAGTCTGGCCCCATCACCTTTTGCTCCAGCACCTCTAGTTCATAAACCTTCGCATCCTTTACCACCAACATCATTTTTCCCAAAATTGACTCCACCAGAAGAAGCTTCAGAAATTTCTTCTCCATCTTCTGACATTAACAAACAGGAAGAGAGGCATAGTAATAAAAAAACAGTTGTTCTTGCTGTAGTTATAACTGCATTGGTGACATTTATAGCTGCAGCATTGCTCTTTTTATGCTGTACTCGGCATCGTAAGACTGGCCATTTCAGACTCAATGATGATAGGCCTCTTCTTAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATTCGTTCGGAAATTCAATAAAAGGGGAGAAAGTTGAGTTTCAGTCATCAAGTAATGGTTTGGTGGACAATAAGAAGTATTCAGTGCAGGAAAGCCAATCAATAGGAGCTCTTAATGCTGCTGCTGGATCACCATTTGAACTGAAACCTCCTCCCGGGAGGGTGGGAGCCACAATCCTTTCTGGACTGCCTCCTTTAAAACCTCCTCCAGGCAGGCTAAACCCTCTTCCTCCTGAGCCACCTTCATTTAGACCTTCTGGTGATGCAGCTCCAGCTGCTGTTGCTGCTGTTGCTACAGCTCCTCCTCCTGCCCCTCAACAGCCTGGTTTGAGTAGCACTCTACCACCCCGACCACCAGCTGGTGCCAGACCTGGCCCACCTCTACCACTACCGCCAGCACTAGCTGGTGCGAGACCTGGTCCTCCTCCACCACCTCCAGCATCAGTTGGTGTGAAACCTGGTCCTCCTCCACCACCACCCACAGCACCAGCTGGTGCCAAACCTGGTCCTCCTCCTCCACCACCCCCAGCTGGTGCCAAACCTGGTCCTCGTCCACCACCACCTCCTATGAGTGGTGTGGCTCCTCCTCGACCTCCACCCTCGTTTGGCTCAAAGGTGCCGCGGCCGTTAGCTAGTGGATCAAAAGATACAGTTGTAGCTGGAGTAGAAGGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCTAACCCGGATCAGTCAATGGTTTGGAATCAAATCAAATCAGGATCTTTCCAGTTTAATGAAGAGATGATAGAGACGCTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTAAAAAACAGAAACAGTCTTCCTCCCAAGACCCTTCACCACTGTTTATCCAGATCATTGACAAAAAGAAAGCACAGAATTTATTGATTCTGTTGCGTGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGACATGAGCTGCCCCCGGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACATCGGATGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATCTATCTCAACTTGGGCCTGCTGATCGTTTCCTGAAAGCCATGGTTGACATTCCATTTGCATTTAAGCGAATGGAAGTTCTCCTTTTCATGGGCTCACTTAAAGAGGATCTTGCAACTACTATGGAATCTTTTGCCATTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAACCGGCTGTTCCTCAAGCTTCTTGAAGCCGTTCTCAAAACTGGCAACCGAATGAATGATGGAACTTTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTCTGAAATTATCTGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACATTTTGTTGTTCTAGAGATTATCCGCTCCGAGGGCATAAAAGCCATCAGAAAGGCAAAAGAGAGCCAGAAATCGTCTAGTATTAAATTGGATGACCTTCACGATAGTACCCGAGAAACAGAAGATCGCTACCATGAAATCGGTCTTCAGGTGGTTTCACGATTGAGCAGTGAACTTGAGAATGTAAAAAAAGCAGCAATTATAGATGCTGACAGCTTAACAGGAACTACTGCCAAACTTGGCCATGGTCTCATAAAAACACGAGACTTGGTAAACAAAAGCATGAAGAATGTGGAGGAAGATAGGGGGTTTTGTGAGACAGTGAAAAGTTTTGTGCAGAATGCTGAGGCTGATGTTATGAAACTGCTGGAAGAGGAGAAGAAAATCGTGGCTTTGGTGAAGAGCACTGGTGATTACTTCCATGGGAATTCTGGGAAGGATGAAGGCACCAGGTTGTTCATAGTAGTACGAGACTTCCTAATAATGGTGGATAAAGTATGCAACGAGGTGAGAGATACAAAGAAGAAGTCGGTTAAAACTCAAAAACAAGAGACTCCTCGAGAAGCATCTTCATCTGAACCACGTCCACCACCTGATTTTCGTCAGCGACTTTTTCCAGCGATTGCTGAAAGGAGGATGGATGACATTAGTTCAGACGATGAGAGTCCATAG 2937 0.4474 MGIQKHMVNIKVTFGVLSVLLLVAAVSSIEKKEAENDFVRELLDPASGLLDEHTELSGSTNIISSEIQPIEQEEIQKFISSYCPQFLGNFLHCLRKNNHPLPVSGKEDDSKIWHVTYMGPLFSRSSDPERKFGRILLQHISEPPSPGPAVGSPTHSLAPSPESSLAPSSEPSLAPSSEPSLAPSPFAPAPLVHKPSHPLPPTSFFPKLTPPEEASEISSPSSDINKQEERHSNKKTVVLAVVITALVTFIAAALLFLCCTRHRKTGHFRLNDDRPLLSLSMSDYSVGPSSYSFGNSIKGEKVEFQSSSNGLVDNKKYSVQESQSIGALNAAAGSPFELKPPPGRVGATILSGLPPLKPPPGRLNPLPPEPPSFRPSGDAAPAAVAAVATAPPPAPQQPGLSSTLPPRPPAGARPGPPLPLPPALAGARPGPPPPPPASVGVKPGPPPPPPTAPAGAKPGPPPPPPPAGAKPGPRPPPPPMSGVAPPRPPPSFGSKVPRPLASGSKDTVVAGVEGEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGKKQKQSSSQDPSPLFIQIIDKKKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKAMVDIPFAFKRMEVLLFMGSLKEDLATTMESFAILEVACKELRNNRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAIRKAKESQKSSSIKLDDLHDSTRETEDRYHEIGLQVVSRLSSELENVKKAAIIDADSLTGTTAKLGHGLIKTRDLVNKSMKNVEEDRGFCETVKSFVQNAEADVMKLLEEEKKIVALVKSTGDYFHGNSGKDEGTRLFIVVRDFLIMVDKVCNEVRDTKKKSVKTQKQETPREASSSEPRPPPDFRQRLFPAIAERRMDDISSDDESP* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2211 978 MobiDBLite consensus disorder prediction 960 978 - -
Gso6g2211 978 MobiDBLite consensus disorder prediction 181 207 - -
Gso6g2211 978 PANTHER FORMIN-LIKE PROTEIN 1 976 - -
Gso6g2211 978 MobiDBLite consensus disorder prediction 927 944 - -
Gso6g2211 978 MobiDBLite consensus disorder prediction 139 231 - -
Gso6g2211 978 ProSiteProfiles Formin homology-2 (FH2) domain profile. 513 944 IPR015425 -
Gso6g2211 978 MobiDBLite consensus disorder prediction 927 978 - -
Gso6g2211 978 SMART it6_source 513 933 IPR015425 -
Gso6g2211 978 MobiDBLite consensus disorder prediction 353 375 - -
Gso6g2211 978 MobiDBLite consensus disorder prediction 391 495 - -
Gso6g2211 978 Gene3D Formin, FH2 domain 518 950 IPR042201 -
Gso6g2211 978 MobiDBLite consensus disorder prediction 338 503 - -
Gso6g2211 978 PANTHER FORMIN-RELATED 1 976 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso6g2211 978 MobiDBLite consensus disorder prediction 156 179 - -
Gso6g2211 978 Pfam Formin Homology 2 Domain 515 918 IPR015425 -
Gso6g2211 978 SUPERFAMILY Formin homology 2 domain (FH2 domain) 461 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2211 Gso-Chr6 42714229 42721573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2211 475 969 FH2 protein (formin) Gene Family AT5G54650 64.400 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2211 - - gmx:100776210 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2211 6 42714229 42721573 Gso6g2211 6 42714229 42721573 ECH
Gso12g1135 12 16230120 16237706 Gso6g2211 6 42714229 42721573 GST
Gso12g1820 12 41894993 41900156 Gso6g2211 6 42714229 42721573 PCT
Gso11g3043 11 46297342 46302530 Gso6g2211 6 42714229 42721573 PCT
Gso6g2211 6 42714229 42721573 Gso12g1820 12 41894993 41900156 PCT
Gso6g2211 6 42714229 42721573 Gso11g3043 11 46297342 46302530 PCT