Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2192 ATGAAGTTTATTCTTACTATGATGAGTTCGATACCTTATATACTGTTTGTCTCTTCTCTTGTAGTTTCCATAGCAGCAGACACATCATCCATTTCACAATCCCAATCCCTCAGTTTCGGAAAAACCATAGTTTCCCCAAGTGGAACCTTTGAACTTGGTTTCTTCCATCTTGGAAATCCAAACAAAAGCTACCTCGGGATTTGGTTCAAGAATATTCCGTCGCGAGACATTGTTTGGGTTGCAAACGGTGGCAACCCAATCAACAATTCCTCTGCCCTCTTGAGCCTAAAAAGTTCTGGCCACTTGGTCCTTACACACAATAACACTGTAGTTTGGTCCACAAGTTCTCTAAAAGAAGCAATAAATCCAGTGGCAAATCTCTTGGATTCTGGCAATCTTGTGATAAGGGATGAGAATGCAGCAAATCAAGAGGCATATCTGTGGCAAAGCTTTGATTACCCTTCTGATACAATGGTGTCAGGAATGAAGATTGGATGGGACCTCAAAAGAAATCTCAGTATTCACCTTTCAGCTTGGAAGAGTGCTGATGATCCAACCCCAGGAGACTTCACTTGGGGTATTATTCTGCACCCTTATCCTGAAATGTATTTGATGAAGGGAAACAAAAAGTACCAGAGAGTCGGACCATGGAATGGTTTGCAGTTCAGTGGCGGCAGGCCGAAAATTAACAATCCCGTTTACCTTTACAAGTTTGTCTCCAACAAGGAAGAGATTTATTACGAATGGACTCTCAAGAATGCTAGTTTACTATCAAAATTGGTAGTTAACCAAACCGCACAAGATCGTTCTCGTTATGTATGGTCAGAGACGACTAAATCATGGGGGTTTTATTCAACAAGGCCGGAAGACCCTTGTGATCATTATGGGATTTGTGGAGCCAATGAATATTGCAGCCCTAGTGTATTACCAATGTGTGAGTGCTTAAAAGGGTACAAGCCTGAGTCTCCTGAAAAATGGAACTCAATGGACAGGACCCAAGGATGTGTCCTCAAACATCCATTGAGTTGCAAGGATGATGGGTTTGCTCCATTGGACAGGTTGAAAGTTCCTGATACTAAAAGAACATATGTGGATGAGAGTATTGATCTAGAGCAATGCAAAACCAAGTGCTTGAAAGATTGTTCTTGTATGGCATATACAAATACAAATATAAGTGGAGCAGGCAGTGGTTGTGTCATGTGGTTTGGTGAGTTATTTGACATCAAACTGTTTCCAGATCGCGAAAGTGGGCAGCGTCTATATATAAGGTTGCCTCCTTCAGAATTAGAGTCTAACTGGCACAAGAAGATCTCTAAAATAGTAAATATAATAACCTTCGTTGCTGCAACTTTAGGCGGTATCCTTGCAATTTTTTTCATCTACAGAAGGAACGTTGCTGATAAGTCAAAGACAAAAGAAAGCATTGAAAGACAACTAGAAGATGTGGATGTGCCTTTGTTCAATCTGCTAACCATCACCATTGCCACTAACAATTTCTTATTGAAAAATAAGATTGGACAAGGTGGCTTTGGACCTGTATATAAGGGAAAATTAGAAGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTAGGTCTGGACAAGGATTAACAGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGGAATCTTGTAAAGCTCCTTGGCTGTTGCATTAAAGGAAAAGAAAAATTACTAGTATATGAATACATGGTTAATGGAAGCCTGGACTCCTTCATATTTGATAAAATAAAAAGTAAATTACTGGATTGGCCTCAACGCTTCCACATAATACTTGGAATTGTTAGGGGGCTTTTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACATTTTACTCGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGCTTGGCAAGAGCTTTCGGAGGAGACCAAACTGAAGGAAACACAGATAGAGTAGTTGGGACTTATGGATACATGGCCCCGGAGTATGCTGTTGATGGGCAATTTTCAATCAAATCTGATGTTTTCAGCTTTGGAATTTTGTTGTTGGAGATTGTATGTGGAAACAAAAATAAAGCTCTTTGTCACGAAAACCAAACTCTTAATCTTGTTGGTCATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAACTTTTTGACTCGAGCATAAAGGACTCGTGTGTTATCTCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAGATGGATATGGTTGAGCCAAAAGAACCTGGTTTCTTTCCAAGGAGAATTTTGAAAGAAGGAAATCTATGCACAAATCTAAACCAAGTGACTTCAAACGATGAATTATCCATTACGTCATTAAGTGGTCGATGA 2451 0.3966 MKFILTMMSSIPYILFVSSLVVSIAADTSSISQSQSLSFGKTIVSPSGTFELGFFHLGNPNKSYLGIWFKNIPSRDIVWVANGGNPINNSSALLSLKSSGHLVLTHNNTVVWSTSSLKEAINPVANLLDSGNLVIRDENAANQEAYLWQSFDYPSDTMVSGMKIGWDLKRNLSIHLSAWKSADDPTPGDFTWGIILHPYPEMYLMKGNKKYQRVGPWNGLQFSGGRPKINNPVYLYKFVSNKEEIYYEWTLKNASLLSKLVVNQTAQDRSRYVWSETTKSWGFYSTRPEDPCDHYGICGANEYCSPSVLPMCECLKGYKPESPEKWNSMDRTQGCVLKHPLSCKDDGFAPLDRLKVPDTKRTYVDESIDLEQCKTKCLKDCSCMAYTNTNISGAGSGCVMWFGELFDIKLFPDRESGQRLYIRLPPSELESNWHKKISKIVNIITFVAATLGGILAIFFIYRRNVADKSKTKESIERQLEDVDVPLFNLLTITIATNNFLLKNKIGQGGFGPVYKGKLEGGQEIAVKRLSSRSGQGLTEFITEVKLIAKLQHRNLVKLLGCCIKGKEKLLVYEYMVNGSLDSFIFDKIKSKLLDWPQRFHIILGIVRGLLYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGLARAFGGDQTEGNTDRVVGTYGYMAPEYAVDGQFSIKSDVFSFGILLLEIVCGNKNKALCHENQTLNLVGHAWTLWKEQNALQLFDSSIKDSCVISEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLCTNLNQVTSNDELSITSLSGR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2192 816 CDD B_lectin 40 154 IPR001480 -
Gso6g2192 816 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Gso6g2192 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Gso6g2192 816 ProSiteProfiles Protein kinase domain profile. 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2192 816 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Gso6g2192 816 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Gso6g2192 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 815 - -
Gso6g2192 816 Pfam Protein tyrosine and serine/threonine kinase 501 770 IPR001245 GO:0004672|GO:0006468
Gso6g2192 816 CDD PAN_AP_plant 339 425 - -
Gso6g2192 816 Pfam D-mannose binding lectin 77 180 IPR001480 -
Gso6g2192 816 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 815 - -
Gso6g2192 816 SMART blect_4 34 154 IPR001480 -
Gso6g2192 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Gso6g2192 816 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2192 816 SMART ntp_6 343 424 IPR003609 -
Gso6g2192 816 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Gso6g2192 816 CDD STKc_IRAK 505 770 - -
Gso6g2192 816 Pfam PAN-like domain 343 408 IPR003609 -
Gso6g2192 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Gso6g2192 816 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gso6g2192 816 Gene3D Phosphorylase Kinase; domain 1 460 574 - -
Gso6g2192 816 Gene3D - 22 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2192 Gso-Chr6 42002633 42014540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2192 426 784 Receptor kinase-like Gene Family AT4G23230 52.632 1.39e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2192 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2192 - - gmx:100812022 1624.76