Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2191 ATGAAGTTTATTCTTACTGTGACGAGTTTCATACTTTATATACTGTTTGTCTCTTCCCTTGTAGTTTCCATAGCAGCAGACACATCATCCATTTCACAATCCCAATCCCTCAGTTTTGGAAGAACCATAGTTTCTCCAAATGGAGTCTTTGAACTTGGATTCTTCAATCTTGGAAATCCAAACAAAAGTTACCTCGGGATTTGGTTCAAGAATATTCCGTCTCAAAACATTGTTTGGGTTGCAAACGGTGGCAACCCAATCAATGATTCCTTTGCCCTCTTGAGCCTAAACAGTTCTGGCCATTTGGTCCTTACACACAACAACACTGTTGTTTGGTCCACAAGTTCTCTAATAGAAACACAGAATCCAGTGGCAAAGCTCTTGGATTCTGGGAATCTTGTGATAAGGGATGAAAATGAAGTGAATCAAGAGGCATATCTGTGGCAAAGTTTTGATTATCCTTCTAATACAGGGTTATCAGGAATGAAGATTGGATGGTACCTCAAAAGAAATCTCAGTATTCACCTTACAGCTTGGAAGAGTGATGATGATCCAACCCCAGGAGACTTCACTTGGGGTATTATTCTGCACCCTTATCCTGAAATCTATTTGATGAAGGGAACCAAAAAGTACTACAGAGTCGGACCATGGAATGGCAGTCCAGGACTTATCAATTCCATTTACTATCACGAGTTTGTCTCTGACGAGGAAGAACTTTCTTTCACGTGGAACCTGAAGAATGCAAGCTTTTTATCAAAAGTGGTAGTTAACCAAACCACACAAGAACGTCCTCGTTATGTATGGTCAGAGACTGAGTCATGGATGCTTTATTCAACAAGGCCTGAAGACTATTGTGACCATTATGGGGTTTGTGGAGCCAATGCATATTGCAGCAGTACTGCATCACCAATCTGTGAGTGTTTAAAAGGGTACACGCCTAAGTCTCCTGAAAAATGGAAATCAATGGACAGGACCCAAGGATGTGTCCTCAAACATCCATTGAGTTGCAAGTATGATGGTTTTGCCCAGGTTGATGGCTTGAAAGTGCCTGATACTAAAAGAACACATGTGGATCAGACTCTTGATATAGAGAAATGCAGAAGCAAGTGCTTGAATGAGTGTTCCTGCATGGCATATACCAATTATAATATAAGTGGAGCAGGAAGTGGATGTATCATGTGGTTTGGCGATTTATTAGACATCAAATTGTATTCTGTTGCAGAAAGTGGGCGGCGTCTACATATAAGGTTGCCTCCTTCTGAATTAGAATCTATCAAGAGCAAGAAGAACTCCAAAATAATTATTGGAACCTCTGTTGCTGCAGCTTTAGGAGTAGTACTTGCTATTTGTTTCATTCACAGAAGAAACATTGCCGATAAGTCAAAGACAAAAAAAAGCAATGACAGACAACTACAGGACGTGGATGTGCCATTGTTTGATCTGCTAACAATCACTGCTGCCACTGACAATTTTTTATTGAACAATAAGATTGGAGAAGGTGGCTTTGGACCTGTTTATAAGGGAAAATTAGAAGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTAGGTCTGGACAAGGAATAACCGAATTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACAGAAATCTTGTAAAGCTCCTTGGCTGTTGCATTAAAGGACAAGAAGAATTACTAGTATATGAATACGTGGTTAATGGCAGCCTAAACTCCTTCATATTTGATCAAACAAAAAGTAAATTATTGGATTGGCCACGACGCTTCAACATAATACTTGGAATTGCAAGGGGACTATTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTCTACTAGATGAAAAGTTAAATCCAAAAATATCTGATTTTGGAATGGCAAGAGCTTTTGGAGGAGACCAAACCGAAGGAAACACAAATAGAGTAGTTGGGACTTATGGATACATGGCCCCGGAGTATGCATTTGATGGAAATTTTTCAATCAAGTCTGATGTTTTCAGCTTTGGTATATTGTTGTTGGAGATTGTATGTGGAATAAAAAATAAATCTCTTTGTCACGAAAACCAAACTCTTAACCTTGTTGGTTATGCATGGGCACTTTGGAAAGAGCAAAATGCTTTACAGCTGATTGACTCAGGCATAAAGGACTCATGTGTTATCCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAAATGGATATGGTTGAGCCAAAAGAGCCTGGTTTCTTCCCAAGAAGGATTTTGAAAGAAGGAAATCTAAAGGAAATGACTTCCAATGATGAATTAACCATTAGCTTATTTAGTGGTCGGTGA 2415 0.3934 MKFILTVTSFILYILFVSSLVVSIAADTSSISQSQSLSFGRTIVSPNGVFELGFFNLGNPNKSYLGIWFKNIPSQNIVWVANGGNPINDSFALLSLNSSGHLVLTHNNTVVWSTSSLIETQNPVAKLLDSGNLVIRDENEVNQEAYLWQSFDYPSNTGLSGMKIGWYLKRNLSIHLTAWKSDDDPTPGDFTWGIILHPYPEIYLMKGTKKYYRVGPWNGSPGLINSIYYHEFVSDEEELSFTWNLKNASFLSKVVVNQTTQERPRYVWSETESWMLYSTRPEDYCDHYGVCGANAYCSSTASPICECLKGYTPKSPEKWKSMDRTQGCVLKHPLSCKYDGFAQVDGLKVPDTKRTHVDQTLDIEKCRSKCLNECSCMAYTNYNISGAGSGCIMWFGDLLDIKLYSVAESGRRLHIRLPPSELESIKSKKNSKIIIGTSVAAALGVVLAICFIHRRNIADKSKTKKSNDRQLQDVDVPLFDLLTITAATDNFLLNNKIGEGGFGPVYKGKLEGGQEIAVKRLSSRSGQGITEFITEVKLIAKLQHRNLVKLLGCCIKGQEELLVYEYVVNGSLNSFIFDQTKSKLLDWPRRFNIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAFDGNFSIKSDVFSFGILLLEIVCGIKNKSLCHENQTLNLVGYAWALWKEQNALQLIDSGIKDSCVIPEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLKEMTSNDELTISLFSGR* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2191 804 SMART ntp_6 336 417 IPR003609 -
Gso6g2191 804 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 803 - -
Gso6g2191 804 CDD B_lectin 40 154 IPR001480 -
Gso6g2191 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gso6g2191 804 Pfam PAN-like domain 336 401 IPR003609 -
Gso6g2191 804 CDD STKc_IRAK 497 762 - -
Gso6g2191 804 SMART blect_4 34 154 IPR001480 -
Gso6g2191 804 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gso6g2191 804 SMART serkin_6 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2191 804 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 803 - -
Gso6g2191 804 Pfam S-locus glycoprotein domain 212 315 IPR000858 GO:0048544
Gso6g2191 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Gso6g2191 804 Pfam Protein tyrosine and serine/threonine kinase 493 762 IPR001245 GO:0004672|GO:0006468
Gso6g2191 804 Gene3D Phosphorylase Kinase; domain 1 452 566 - -
Gso6g2191 804 CDD PAN_AP_plant 332 418 - -
Gso6g2191 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Gso6g2191 804 Gene3D - 22 151 IPR036426 -
Gso6g2191 804 Gene3D Transferase(Phosphotransferase) domain 1 567 773 - -
Gso6g2191 804 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Gso6g2191 804 ProSiteProfiles Protein kinase domain profile. 491 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2191 804 SUPERFAMILY Protein kinase-like (PK-like) 470 762 IPR011009 -
Gso6g2191 804 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Gso6g2191 804 Pfam D-mannose binding lectin 77 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2191 Gso-Chr6 41993568 42000336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2191 433 786 Receptor kinase-like Gene Family AT4G23190 51.381 2.17e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2191 PK_Tyr_Ser-Thr 5.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2191 - - gmx:100812022 1598.56