Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2184 ATGGAATCTCATTTTGCTAAATTATCAAAGCTAATATGTCTGGGGCCGGTTAATGATGATGTTCGAGTTGTTGGAATTACTGGGATGGGTGGAATAGGAAAGTCCACTCTTGGTCGAGCTTTATATGAAAGAATCTCTCATCAATTTAATTCTCGTTGTTATATTGATGATGTAAGCAAACTTTATCAAGGTTATGGTACATTAGGTGTACAAAAAGAGTTACTTTCTCAGTCTCTAAATGAAAGAAATCTAGAGATTTGCAATGTATCTAATGGAACACTTCTGGTATGGGAGAGGCTATCCAATGCAAAGGCACTTATAGTTCTTGACAATGCTGATCAAGATAAACAACTTGATATGTTTACTGGGGGTAGAGTTGATCTGTTACGCAAATGTCTAGGTAGAGGAAGCATAGTCATTATAATTTCTAGAGATAAACAAATATTGAAGGCACATGGAGTAGATCTTATTTACCAAGTGAAACCATTGAATTACAATGATGCTGTTCGATTGTTTTGCAAAAAAGCATTCAAAAATAATTATATTATGAGTGATTTTGAAAATTTGACTTATGATGTATTATCACATTGTCAAGGTCATCCTTTAGCAATTGAAGTGTTAGGCTCATCTTTATTTGATAAAGATGTCTTACATTGGAGGAGTGCACTGGCTTCGTTAAGAGAAAATAAAAGTAAAAGTATTATGGATGTGTTGCGAATAAGTTTTGATCAATTAGAGGATACACACAAGGAAATATTTCTAGATATTGCATGTTTCTTCAATTTCTTCAATGAGGATGATGTGAAATATGTGAAGGAAGTTCTAGATTTTCGTGGATTTAATCCCGAATATGGCCTACAAGTTCTCGTTGATAAATCACTCATAACCATGGATTCGAGGTGGATTCAAATGCATGACTTGTTGCGCGATTTGGGCAAGTATATTGTTAGAGAAAAATCACCTAGGAAGCCATGGAAGTGGAGCAGGTTGTGGGATTTTAAAGATTTCCTTAAAGTTATGTCAAATAATAAGGTAGCAAAAAATGTTGAGGTCATAATAATTGAAGATCCATATGGCATTTTTCGAACAAGAACAATGAGGGTTGATGCTCTATCAACAATGAGGGTTGATGCTCTATCAACAATGAGTAGCCTTAAGCTTCTCATATTTGGATATAGGATAGCTGGCTTCAAAATCGAAATCAATTTTTCAGGAACACTTGCTAAGCTTTCCAATGAATTAGGATATCTTCGTTGGCCAAAGTATCCTTTTGAGTGTTTGTCACCAAGTATTGAGCCGGACAAACTTGTTGAGTTGATTCTACCTAGAAGCAACATCAAACAACTTTGGGAAGGCACAAAGCCTCTACCCAATTTGAGGCGTTTGAATCTCTCTGGCTCCAAAAATCTAATTAAAATGCCATATATTGGAGATGCCCTGTATCTTGAGAGACTTGATCTCGAAGGATGTATACAACTCGAAGAGATCGGTCTGTCCGTTGTTCTTTCACGAAAGCTTACTTCTCTGAATTTGAGAAATTGCAAAAGTCTTATCAAGTTGCCACCATTTGGAGAGGATCTAATTCTTCAAAATCTAGATCTCGAAGGATGTAAAAAACTCAGACACATTGATCCATCCATCGGTCTTCTAAAAAAGCTCAGAAGATTGAATTTGAAAAACTGCAAAAATCTAGTAAGCTTACCCAATAGCATACTAGGCCTCAATTCTCTTCAATATCTGATTCTCTCTGGCTGTTCAAAACTGTACAACACCGAGTTATTTTATGAACTAAGGGATGCAGAGCAATTGAAGAAGATTGATATAGATGGAGCTCCTATTCATTTCCAATCAACATCTTCCTACTCCAGACAACATCAAAAATCAGTTAGTTGCTTAATGCCTTCCTCCCCAATATTTCCATGGATGCGTGAACTTGATCTAAGTTTCTGTAATTTAGTTGAAATCCCTGATGCTATTGGAATTATGAGTTGCTTAGAAAGGCTAGATTTAAGTGGTAACAATTTTGCTACACTGCCCAACCTCAAGAAGCTTTCCAAACTGGTCTGTTTAAAGTTACAACATTGCAAGCAGTTGAAATCTTTGCCTGAGCTCCCTTCACGGATTGGCTTCGTAACTGATTCATCGTATTGTGCACTAAGACAAACAGGATTATACATTTTTAACTGCCCAGAATTAGTTGATAGGGAACGCTGCACTGACATGGCTTTTTCATGGATGATGCAATTGTTTCAGTACCAGGTGAAATACAAGATTGAAAGTGTTAGTCCAGGAAGTGAAATACGAAGGTGGTTCAATAATGAGCATGAGGGAAATTGTGTAAGCTTAGACGCATCTCCTGTTATGCATCACCATAATTGGATTGGCGTTGCGTTTTGTGCAATATTCGTCGTACCTCATGAAACACTCTCAGCGATGGGTTTTTCAGAAGCAGAATGGTCATTTCCTTTGTTTGGTGATATTCCAGTGGATTTATATGGAGATGTAGATCGAGAACTTGTTTTAGACAAATCAGATCACATGTGTCTATTCTATGTTGATCGACTTGACATCATTGCAGATTTCCATCTGAAGCACAAATATCTTGGCAGATTGCTTTTGAAATGTGATAATGAAGGGATAAGGTTCAAAGAATCATATGCTGAGGTGAAGAAATATGGATATCGCTGGGTATATATAGGGGATATAGAATGGTCGGCTAGGAAGCGCAAATTTGGGGCTAGGAAGCGCAAATTTGGGGAAATTGAAGAAAATGAAGGAAAAAGAAAGAAAGGAATAATGTCAGCAGAAGGGAGAAAAAATGATGCAACCACCTCCCAGAAAAAGACAATCAAGTTGTTGCTAAATGAATTTCAAAATCTTAGCCTATAG 2889 0.3679 MESHFAKLSKLICLGPVNDDVRVVGITGMGGIGKSTLGRALYERISHQFNSRCYIDDVSKLYQGYGTLGVQKELLSQSLNERNLEICNVSNGTLLVWERLSNAKALIVLDNADQDKQLDMFTGGRVDLLRKCLGRGSIVIIISRDKQILKAHGVDLIYQVKPLNYNDAVRLFCKKAFKNNYIMSDFENLTYDVLSHCQGHPLAIEVLGSSLFDKDVLHWRSALASLRENKSKSIMDVLRISFDQLEDTHKEIFLDIACFFNFFNEDDVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDSRWIQMHDLLRDLGKYIVREKSPRKPWKWSRLWDFKDFLKVMSNNKVAKNVEVIIIEDPYGIFRTRTMRVDALSTMRVDALSTMSSLKLLIFGYRIAGFKIEINFSGTLAKLSNELGYLRWPKYPFECLSPSIEPDKLVELILPRSNIKQLWEGTKPLPNLRRLNLSGSKNLIKMPYIGDALYLERLDLEGCIQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPPFGEDLILQNLDLEGCKKLRHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKLYNTELFYELRDAEQLKKIDIDGAPIHFQSTSSYSRQHQKSVSCLMPSSPIFPWMRELDLSFCNLVEIPDAIGIMSCLERLDLSGNNFATLPNLKKLSKLVCLKLQHCKQLKSLPELPSRIGFVTDSSYCALRQTGLYIFNCPELVDRERCTDMAFSWMMQLFQYQVKYKIESVSPGSEIRRWFNNEHEGNCVSLDASPVMHHHNWIGVAFCAIFVVPHETLSAMGFSEAEWSFPLFGDIPVDLYGDVDRELVLDKSDHMCLFYVDRLDIIADFHLKHKYLGRLLLKCDNEGIRFKESYAEVKKYGYRWVYIGDIEWSARKRKFGARKRKFGEIEENEGKRKKGIMSAEGRKNDATTSQKKTIKLLLNEFQNLSL* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2184 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 256 IPR027417 -
Gso6g2184 962 MobiDBLite consensus disorder prediction 924 944 - -
Gso6g2184 962 Gene3D - 1 156 IPR027417 -
Gso6g2184 962 Gene3D Ribonuclease Inhibitor 528 612 IPR032675 -
Gso6g2184 962 Gene3D Ribonuclease Inhibitor 370 527 IPR032675 -
Gso6g2184 962 Gene3D Ribonuclease Inhibitor 615 733 IPR032675 -
Gso6g2184 962 Pfam Leucine Rich Repeat 435 454 IPR011713 -
Gso6g2184 962 SUPERFAMILY L domain-like 303 749 - -
Gso6g2184 962 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 517 IPR044974 GO:0006952
Gso6g2184 962 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 516 904 IPR044974 GO:0006952
Gso6g2184 962 Pfam NB-ARC domain 19 235 IPR002182 GO:0043531
Gso6g2184 962 PRINTS Disease resistance protein signature 23 38 - -
Gso6g2184 962 PRINTS Disease resistance protein signature 99 113 - -
Gso6g2184 962 PRINTS Disease resistance protein signature 197 211 - -
Gso6g2184 962 PRINTS Disease resistance protein signature 548 564 - -
Gso6g2184 962 ProSiteProfiles Leucine-rich repeat profile. 664 685 IPR001611 GO:0005515
Gso6g2184 962 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 517 - -
Gso6g2184 962 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 516 904 - -
Gso6g2184 962 ProSitePatterns 'Homeobox' antennapedia-type protein signature. 638 643 IPR001827 GO:0003677|GO:0003700|GO:0006355
Gso6g2184 962 Gene3D - 163 246 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2184 Gso-Chr6 41883839 41887075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2184 3 594 WRKY Transcription Factor Family AT5G45050 30.733 2.42e-70 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2184 - - gmx:100778550 1528.46