Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2155 ATGGCTCTATTTCTTGCTATGTTAGTTTTTTCAAACCCACTAGTGTTCTTCTCTCAAATTTCCTATGCAACTGATACCATTACTCAGTCCCAGCCACTTCTTGATGGCAGCACCTTGGTCTCCAAGGAAGGAACCTTTGAGTTGGGTTTCTTTACTCCCGGTAATTCCCCAAACCACTATGTCGGAATATGGTTCAAAAACATCCCCATGAGAACAGTTGTTTGGGTTGCCAACCGCGACAACCCTGCAAAAGATAAATCCAACATGTTGTCTCTAAGCAAAGATGGAAACCTCATACTCCTCGGCAAGAATCGGTCTCTTATTTGGTCGACAAATGCAACAATAGCAGTTTCGAATCCGGTTGTGCAACTTTTAGACAACGGAAATTTGGTAATAAGAGAGGAAAAGGACGACAACATGGACAATGAAGAGAATTTTGTGTGGCAGAGCTTTGACTATCCTTGTGATACACAATTACAAGGAATGAAGTTGGGGTGGAACCTTAAAACCGGCCTCAATCGGTATCTTACAGCTTGGAAAAATTGGGAAGATCCATCTTCGGGAGATTTTACTTCAGGGTTGAAGCTTGGAACCAATCCTGAATTGGTTATATCGAAAGGCTCGAATGAATACTATAGGAGTGGCCCTTGGAATGGAATTTTTTCTAGTGGAGTGTTTGGATTTAGTCCTAACCCACTTTTCGAATATAAATATGTCCAAAATGAAGATGAAGTGTACGTGAGGTACACCCTCAAGAATAGTTCTGTGATTTCGATAATTGTTTTGAACCAAACTCTTTTTCTTCGCCAACGCATTACATGGATTCCTCACACTAGAACTTGGAGTGTGTACCAATCTCTACCACAAGACAGTTGTGATGTTTATAATGTTTGTGGAGCGTATGGGAATTGCATGATTAATGCCTCCCCTGTGTGCCAATGCTTGGAGGGATTTAAGCCAAAATCACCCCAAGGTTGGAATCAAATGGATTGGACAAAAGGGTGTGTGCGTAGTGAACCATGGAGTTGTGGAGTAAAAAACAAAGATGGTTTTCGTCTAATTGCTGGGATGAAAATGCCAGATACTACACATTCTTGGATCAATAGAAGTATGACACTTGAAGATTGCAAGGCCAAATGCTTGAAAAATTGTTCCTGCACGGCTTTTGCAAACATGGACACCGGTGGTGGAGGTAGTGGTTGCTCCATTTGGTTTGGTGATCTTGTTGATTTGAGAATTTCTGAAAGTGGGCAAGATCTATATGTTCGAATGGCCATTTCAGGCACGGGTAAAGACAATGTGAATGCAGATGCTAAACATAAGCATCTAAAAAAGGTAGTCTTGGTGGTCGCAATCACAGTTTCTTTAGTCCTTCTGATGTTATTGGCATTTTCCTACATTTACATGACCAAAACAAAGTATAAAGAAAATGGAACATGGACAGAGGAGAAAGATGATGGTGGGCAAGAAAATCTGGAGCTTCCTTTCTTTGATCTTGCTACAATAATTAATGCCACCAATAACTTCTCAATTGATAACAAGCTTGGTGAAGGTGGCTTTGGGCCGGTATATAAGGGTACAATGTTAGACGGACACGAGATTGCAGTCAAAAGGCTTTCTAAGAGTTCTGGGCAAGGATTGAAAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAGCATCGAAATCTTGTTAAGGTTCTTGGTTGCTGCAGCGAAGGAGAGGAAAAAATGTTACTCTATGAATACATGCCCAACAGAAGTCTCGATTCATTTATTTTTGATCCAGCTCAAAGTAAACTTTTAGATTGGCCTACGCGCTTTAACATCTTGTGTGCAATTGCTCGGGGACTTCTGTATCTTCATCAAGATTCTAGATTAAGAATCATACACAGAGATTTGAAGGCAAGTAATATTTTACTAGACAATAATATGAACCCAAAAATTTCAGATTTTGGCTTGGCTAAAATGTGTGGAGGTGATCAAGTTGAAGGGAATACAAACAGAATTGTCGGAACATACGGTTATATGGCACCTGAATATGCTATTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGCGTATTGTTGTTAGAAATTATAAGTGGAAAGAAAAACAGAACAGTAACATATGAAGAGCACAGTGACAATCTTATTGGACATGCATGGAGATTGTGGAAAGAGGGCATTCCAGAACAATTGATTGATGCTAGTCTTGTGGACTCATGTAATATATCTGAACTTGTACGTTGCATTCAAGTTGGTCTTTTATGTCTGCAACACCATCCTGAAGATAGGCCAAACATGACAACTGTGGTTGTAATGTTGAGCAGTGAAAATAGTTTATCTCAACCTAAGGATGAAATGATGGAGGAACATTGA 2394 0.3956 MALFLAMLVFSNPLVFFSQISYATDTITQSQPLLDGSTLVSKEGTFELGFFTPGNSPNHYVGIWFKNIPMRTVVWVANRDNPAKDKSNMLSLSKDGNLILLGKNRSLIWSTNATIAVSNPVVQLLDNGNLVIREEKDDNMDNEENFVWQSFDYPCDTQLQGMKLGWNLKTGLNRYLTAWKNWEDPSSGDFTSGLKLGTNPELVISKGSNEYYRSGPWNGIFSSGVFGFSPNPLFEYKYVQNEDEVYVRYTLKNSSVISIIVLNQTLFLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGNCMINASPVCQCLEGFKPKSPQGWNQMDWTKGCVRSEPWSCGVKNKDGFRLIAGMKMPDTTHSWINRSMTLEDCKAKCLKNCSCTAFANMDTGGGGSGCSIWFGDLVDLRISESGQDLYVRMAISGTGKDNVNADAKHKHLKKVVLVVAITVSLVLLMLLAFSYIYMTKTKYKENGTWTEEKDDGGQENLELPFFDLATIINATNNFSIDNKLGEGGFGPVYKGTMLDGHEIAVKRLSKSSGQGLKEFKNEVILCAKLQHRNLVKVLGCCSEGEEKMLLYEYMPNRSLDSFIFDPAQSKLLDWPTRFNILCAIARGLLYLHQDSRLRIIHRDLKASNILLDNNMNPKISDFGLAKMCGGDQVEGNTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRTVTYEEHSDNLIGHAWRLWKEGIPEQLIDASLVDSCNISELVRCIQVGLLCLQHHPEDRPNMTTVVVMLSSENSLSQPKDEMMEEH* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2155 797 Gene3D Phosphorylase Kinase; domain 1 471 584 - -
Gso6g2155 797 Pfam D-mannose binding lectin 72 180 IPR001480 -
Gso6g2155 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 791 - -
Gso6g2155 797 Pfam PAN-like domain 343 411 IPR003609 -
Gso6g2155 797 SMART serkin_6 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2155 797 Gene3D Hepatocyte Growth Factor 342 426 - -
Gso6g2155 797 SMART ntp_6 346 424 IPR003609 -
Gso6g2155 797 Pfam Protein tyrosine and serine/threonine kinase 510 778 IPR001245 GO:0004672|GO:0006468
Gso6g2155 797 SUPERFAMILY Protein kinase-like (PK-like) 493 781 IPR011009 -
Gso6g2155 797 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Gso6g2155 797 CDD PAN_AP_plant 342 425 - -
Gso6g2155 797 Gene3D Transferase(Phosphotransferase) domain 1 585 796 - -
Gso6g2155 797 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 791 - -
Gso6g2155 797 CDD B_lectin 30 154 IPR001480 -
Gso6g2155 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Gso6g2155 797 ProSiteProfiles Protein kinase domain profile. 509 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2155 797 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Gso6g2155 797 SMART blect_4 30 154 IPR001480 -
Gso6g2155 797 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Gso6g2155 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Gso6g2155 797 PIRSF SRK 1 796 IPR024171 GO:0004674
Gso6g2155 797 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Gso6g2155 797 Gene3D - 18 151 IPR036426 -
Gso6g2155 797 CDD STKc_IRAK 515 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2155 Gso-Chr6 41271327 41278089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2155 447 789 Receptor kinase-like Gene Family AT4G23230 56.686 4.73e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2155 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2155 - - gmx:100790436 1588.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2155 6 41271327 41278089 Gso6g2155 6 41271327 41278089 ECH