Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2147 ATGGTGCGTAGCATTATAATGTTATGTATTTGGTTCTTCATATTCTTCGACCAGCCGGGAACTTCCACTTTAATAGACAGTTTGGCAGCGGGTCAATCTATTCGAGATGGTGAGACTTTGGTTTCAGCAGGTGGAATTACCAAAGTAGGCTTCTTTAGCCCGGGAAATTCAACAAGACGATACTTGGGTATATGGTACACAAATGTATCCCCTATAACTGTGGTGTGGGTGGCTAACCGAAATTCACCTCTTGAGAATAACTCAGGAGTCCTCAAACTCAATGAAAAAGGGATTCTTGAGCTTCTCAATGGTAAAAACAGCACCATTTGGTCATCCAATATATCAAGCAAAGCAGTTAATTATCCAATTGCACAGCTCTTGGATTCAGGAAATTTTGTAGTGAAATATGGACAGGAAATTACCAATGAGGACAGCGTCTTGTGGCAGAGTTTTGATTATCCATGTGATTCTTTGATGCCAAGAATGAAACTTGGATGGAACTTAGAGACTGGTCTAGAAAGATATTTATCATCTTGGAGAAGTGTTGACGATCCTGCTTTGGGAGAATATACTGTCAAAATTGATCTAAGGGGATATCCTCAAATTATTAAATTCAAGGGACCTGATATAGTATCTAGAGCAGGTTCATGGAATGGCTTGTCGACTGTTGGAAATCCGGGTTCCACTCGTTCACAAAAAATGGTGATCAATGAAAAAGAGGTGTATTTTGAGTTCGAACTTCCTGATAGATCAGAATTCGGCATATCTTCATTGACCCCTTCAGGCACATCGCTGATTTTATATTGGACAACTCAAAGAAGCACCCGGCAAGCTGTCTTGTCAAATGCGGACAAAGATCAATGTGGGAGTTATGCTTTTTGTGGTGCAAATTCTATATGCATTTATGATGGTAACGTTCCAACTTGTGAATGCCTGAGAGGATATGCTCCCAAGCATCCTGATCAATGGAATATAGCAATTTGGTCAGATGGCTGTGTTCCAAGGAATAAATCTAATTGCACAAACAGTTATACAGACGGCTTCTTGAAGTACACAAACATGAAATTGCCAGACACCTCTTCATCATGGTTTAGTAAGACCATGAACCTTGATGAGTGTCAGAAGTCATGTCTTAAAAATTGTTCTTGTACAGCATATGCAAATTTAGATATCCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTTAATACTCTAGTTGACCTGAGGAATTTCTCTGAATTGGGACAAGACTTTTATATCAGACTCTCTGCTTCAGAATTAGATCATGGTGACCAAAGAAAAATCAACAAAAAGATTGTAGCAATAGCTGTTGGTGCGACTATCTTTGGATTAATTATCACATGTGTATGTATATTGGTAATTAAAAATCCAGGGGCTGCAAGAAAAATTTACAATAAACATTACAGAAATATACTAAGGAAGGAAGACATTGATTTGCCAACTTTCAGTTTTTCAGTCTTAGCTAATGCAACTGAAAACTTTTCAACCAAAAACAAGCTTGGAGAAGGTGGCTATGGACCCGTATACAAGGGCAAACTGTTAGATGGGAAAGAGTTAGCTGTGAAAAGGCTTTCAAAGAAGTCTGGACAAGGGTTGGAAGAGTTCACAAATGAAGTGGCATTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAGCTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAAATTTTGATTTATGAATACATGCCCAACCACAGCTTGGACTACTTTGTCTTTGATGAATCGAAAAGGAAATTGCTAGATTGGGATAAGCGTTTCGATATTATCAGTGGCATTGCTCGAGGACTTCTGTATCTTCATCAAGACTCTAGGTTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATTTTACTAGATGAAAATTTGGATCCCAAAATATCTGACTTTGGTTTGGCTCGTTCATTTTTGGGGGATCAAGTTGAAGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTACGCTGCACGTGGGCATTTCTCGGTGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTTGAGATTGTTACTGGGAAGAAAAACAGAGAATTTTCAGACCCAGAATGCTACAATAATCTTCTTGGACATGCATGGAGATTATGGACTGAAGAGATGGCACTGGAACTACTCGATGAAGTGTTGGGAGAACAATGCACACCCAGTGAAGTTATACGATGTGTACAGGTAGGCCTATTATGTGTGCAACAAAGACCACAAGATAGGCCAAACATGTCGTCAGTGGTATTAATGTTGAATGGTGAAAAACTATTGCCAAAGCCAAAGGTTCCTGGATTTTACACTGAAGCAGAGGTTACATCTGAAGCAAATAATTCATTGGGAAATCCCAGACTGTGCTCAGTTAATGAACTTTCTATCACTATGTTCGATGCAAGATAG 2460 0.3919 MVRSIIMLCIWFFIFFDQPGTSTLIDSLAAGQSIRDGETLVSAGGITKVGFFSPGNSTRRYLGIWYTNVSPITVVWVANRNSPLENNSGVLKLNEKGILELLNGKNSTIWSSNISSKAVNYPIAQLLDSGNFVVKYGQEITNEDSVLWQSFDYPCDSLMPRMKLGWNLETGLERYLSSWRSVDDPALGEYTVKIDLRGYPQIIKFKGPDIVSRAGSWNGLSTVGNPGSTRSQKMVINEKEVYFEFELPDRSEFGISSLTPSGTSLILYWTTQRSTRQAVLSNADKDQCGSYAFCGANSICIYDGNVPTCECLRGYAPKHPDQWNIAIWSDGCVPRNKSNCTNSYTDGFLKYTNMKLPDTSSSWFSKTMNLDECQKSCLKNCSCTAYANLDIRDGGSGCLLWFNTLVDLRNFSELGQDFYIRLSASELDHGDQRKINKKIVAIAVGATIFGLIITCVCILVIKNPGAARKIYNKHYRNILRKEDIDLPTFSFSVLANATENFSTKNKLGEGGYGPVYKGKLLDGKELAVKRLSKKSGQGLEEFTNEVALISKLQHRNLVKLLGCCIEGEEKILIYEYMPNHSLDYFVFDESKRKLLDWDKRFDIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDENLDPKISDFGLARSFLGDQVEANTNRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVTGKKNREFSDPECYNNLLGHAWRLWTEEMALELLDEVLGEQCTPSEVIRCVQVGLLCVQQRPQDRPNMSSVVLMLNGEKLLPKPKVPGFYTEAEVTSEANNSLGNPRLCSVNELSITMFDAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2147 819 Pfam PAN-like domain 340 408 IPR003609 -
Gso6g2147 819 CDD PAN_AP_plant 337 423 - -
Gso6g2147 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Gso6g2147 819 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Gso6g2147 819 SMART blect_4 31 154 IPR001480 -
Gso6g2147 819 SMART ntp_6 343 422 IPR003609 -
Gso6g2147 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Gso6g2147 819 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Gso6g2147 819 Pfam D-mannose binding lectin 73 180 IPR001480 -
Gso6g2147 819 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Gso6g2147 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Gso6g2147 819 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Gso6g2147 819 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 20 817 - -
Gso6g2147 819 CDD STKc_IRAK 507 774 - -
Gso6g2147 819 SMART serkin_6 501 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2147 819 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672|GO:0006468
Gso6g2147 819 CDD B_lectin 32 154 IPR001480 -
Gso6g2147 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 817 - -
Gso6g2147 819 SUPERFAMILY Protein kinase-like (PK-like) 485 772 IPR011009 -
Gso6g2147 819 Gene3D - 21 151 IPR036426 -
Gso6g2147 819 Gene3D Hepatocyte Growth Factor 339 420 - -
Gso6g2147 819 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Gso6g2147 819 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2147 819 Pfam S-locus glycoprotein domain 213 318 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2147 Gso-Chr6 41069959 41073801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2147 489 819 Receptor kinase-like Gene Family AT4G11530 55.718 7.65e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2147 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2147 - - gmx:100784066 1658.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2147 6 41069959 41073801 Gso6g2147 6 41069959 41073801 ECH