Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2137 ATGGTGAAACTTTGGTTTCTGCTGGTGGAATTATTGAAGTGGGTTTTCTTCAGTCCCGGAAATTCAACAAGAAGATACTTTGGTGTATGGTACAAAAATGTATCTCCTTTGACAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATAAATCAGGAGTTCTAAAACTCAACGAAAAAGGGATTATTGTGCTTCTAAATGCTACAAACAGCACCCTTTGGTCATCATCCAACATATCAAGCAAAGCAAGGAATAATGCAACTGCTCATCTCTTGGATTCGGGAAATTTTGTAGTGAAACATGGACACAAAACTAACAGTGTCTTGTGGCAGAGTTTTGATTATCCGGGTAATACATTGATGCAAGGGATGAAACTTGGATGGGACTTGGAGACTGGTTTAGAAAGATCAATATCATCTTGGAAAAGCGTTGAGGATCCAGCTGAGGGAGAATATGTTATAAGAATTGATCTCAGAGGATATCCTCAAATGATTGAATTCAAGGGATTTGATATTATATTTAGATCAGGATCGTGGAATGGCTTGTCTACAGTTGGATATCCAGCTCCAGTTAATCTATCATTGCCTAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTTCGAGATTCTTGATAGTTCAGTCTTCGCCATATTTACGCTGGCCCCTTCAGGCGCTGGGCAGAGAATTTTTTGGACAACTCAAACTACCACCCGGCAAGTCATCTCAACTCAGGCACAGGATCAATGCGAGATTTATGCCTTTTGTGGTGCAAATTCTATATGCAGTTATGTTGATAACCAAGCAACTTGTGAATGCCTGAGAGGATATGTTCCCAAGTCTCCTGATCAATGGAATATAGCAATTTGGTTGGGTGGTTGTGTTCAGAAGAATATATCAAATTGCGAAATCAGGTATACAGATGGATTCTTGAAGTACAGACACATGAAATTGCCAGACACATCTTCATCATGGTTTAATAAAACCATGAACCTTGGTGAATGTCAGAAGTCATGTCTTAAAAATTGTTCCTGTACAGCATATGCAAATTTAGATATCCGTAATGGAGGAAGTGGCTGTCTACTTTGGTTTAATATTCTAGTTGACATGAGGAATTTCTCTCTATGGGGACAAGACTTTTATATCAGAGTCCCTGCTTCAGAATTAGATGACACTGGCAACAGAAAAATCAAGAAAAAGATAGTAGGAATCACCGTTGGTGTGACCACTTTTGGATTAATCATCACATGTTTATGCATATTTATGGTTAAAAATCCAGGGGCTGTAAGAAAATTTTACAACAAGCATTACAACAATATAAAGAGAATGCAAGACTTGGATTTGCCAACTTTCAATTTGTCAGTCTTAACTAAGGCCACTCGAAACTTTTCTTCTGAAAACAAGCTTGGAGAAGGTGGCTTTGGACCAGTATACAAGGGCACACTGATAGATGGGAAAGAGATAGCTGTGAAAAGGCTTTCAAAGAAATCTGTACAAGGGTTGGATGAGTTCAAAAATGAAGTGGCATTGATTGCAAAACTTCAGCATCGTAATCTTGTAAAGCTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAAATGTTGATTTATGAGTACATGCCAAACCAAAGCTTGGACTATTTTGTTTTTGATGAAACCAAAAGGAAGTTCCTAGATTGGGGTAAACGTTTCAATATTATTATTGGCATTGCTCGAGGACTTCTATATCTTCATCAGGACTCTAGGCTAAGGATTATTCACAGAGATCTAAAAACTAGCAATATTTTACTAGATGAAAATTTGGATCCCAAAATATCCGACTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTACGCTGCGCGTGGGCATTTCTCAGTGAAATCAGATGTTTTTAGTTATGGTGTGATAGTATTAGAGATTGTAAGTGGGAAGAAAAACAGAGAATTTTCAGATCCAGAACACTACAATAATCTTCTTGGACATGCATGGAGATTGTGGACTGAACAGAGGTCATTGGATCTACTGGATGAAGTGTTGGGAGAACCATGCACGCCCTTTGAAGTCATACGATGCATACAGGTAGGCCTATTATGCGTGCAACAAAGATCAGAAGATAGGCCAGACATGTCATCAGTGGTTTTAATGTTGAATTGTGATAAAGAATTACCAAAGCCAAAGGTACCTGGTTTTTACACTGAAACTGATGCTAAACCAGATGCAAATTCTTCATTTGCAAATCACAAACCATACTCAGTTAATGAACTTTCAATCACAATGTTAGATGCAAGATAG 2352 0.3848 MVKLWFLLVELLKWVFFSPGNSTRRYFGVWYKNVSPLTVVWVANRNTPLENKSGVLKLNEKGIIVLLNATNSTLWSSSNISSKARNNATAHLLDSGNFVVKHGHKTNSVLWQSFDYPGNTLMQGMKLGWDLETGLERSISSWKSVEDPAEGEYVIRIDLRGYPQMIEFKGFDIIFRSGSWNGLSTVGYPAPVNLSLPKFVFNEKEVYYEFEILDSSVFAIFTLAPSGAGQRIFWTTQTTTRQVISTQAQDQCEIYAFCGANSICSYVDNQATCECLRGYVPKSPDQWNIAIWLGGCVQKNISNCEIRYTDGFLKYRHMKLPDTSSSWFNKTMNLGECQKSCLKNCSCTAYANLDIRNGGSGCLLWFNILVDMRNFSLWGQDFYIRVPASELDDTGNRKIKKKIVGITVGVTTFGLIITCLCIFMVKNPGAVRKFYNKHYNNIKRMQDLDLPTFNLSVLTKATRNFSSENKLGEGGFGPVYKGTLIDGKEIAVKRLSKKSVQGLDEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNQSLDYFVFDETKRKFLDWGKRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDENLDPKISDFGLARSFLGDQVEANTNRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPEHYNNLLGHAWRLWTEQRSLDLLDEVLGEPCTPFEVIRCIQVGLLCVQQRSEDRPDMSSVVLMLNCDKELPKPKVPGFYTETDAKPDANSSFANHKPYSVNELSITMLDAR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2137 783 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 781 - -
Gso6g2137 783 Pfam Domain of unknown function (DUF3403) 741 783 IPR021820 GO:0004674
Gso6g2137 783 CDD STKc_IRAK 471 737 - -
Gso6g2137 783 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 781 - -
Gso6g2137 783 SMART ntp_6 307 386 IPR003609 -
Gso6g2137 783 ProSiteProfiles Bulb-type lectin domain profile. 1 113 IPR001480 -
Gso6g2137 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 39 147 IPR036426 -
Gso6g2137 783 Gene3D - 11 114 IPR036426 -
Gso6g2137 783 CDD B_lectin 16 117 IPR001480 -
Gso6g2137 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Gso6g2137 783 CDD PAN_AP_plant 302 387 - -
Gso6g2137 783 Gene3D Hepatocyte Growth Factor 303 381 - -
Gso6g2137 783 Gene3D Transferase(Phosphotransferase) domain 1 541 746 - -
Gso6g2137 783 SMART serkin_6 465 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2137 783 SMART blect_4 3 117 IPR001480 -
Gso6g2137 783 Pfam Protein tyrosine and serine/threonine kinase 468 733 IPR001245 GO:0004672|GO:0006468
Gso6g2137 783 Pfam PAN-like domain 308 372 IPR003609 -
Gso6g2137 783 ProSiteProfiles EGF-like domain profile. 248 285 IPR000742 -
Gso6g2137 783 PIRSF SRK 12 783 IPR024171 GO:0004674
Gso6g2137 783 Pfam S-locus glycoprotein domain 175 283 IPR000858 GO:0048544
Gso6g2137 783 ProSiteProfiles Protein kinase domain profile. 465 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2137 783 ProSiteProfiles PAN/Apple domain profile. 304 387 IPR003609 -
Gso6g2137 783 Pfam D-mannose binding lectin 38 143 IPR001480 -
Gso6g2137 783 Gene3D Phosphorylase Kinase; domain 1 438 540 - -
Gso6g2137 783 SUPERFAMILY Protein kinase-like (PK-like) 448 736 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2137 Gso-Chr6 40754347 40757881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2137 445 783 Receptor kinase-like Gene Family AT4G23140 54.000 9.25e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2137 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2137 - - gmx:100819157 1553.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2137 6 40754347 40757881 Gso6g2137 6 40754347 40757881 ECH