Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2133 ATGTTATTTATTTGGTTCTGCTTATTCTCCTACATGACCTCAACTTCCACTTCACTAGACAGTTTAGCAGTGAGTCAATCCATTCGAGACGGCGAGACTTTGGTTTCAGCAGGTGGAATTACTGAACTTGGTTTCTTCATCCCTGGAAATTCAGCAAGACGATACTTGGGTATATGGTTCAGAAATGTATCCCCTTTCACAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGACAATAAATCAGGAGTTCTCAAACTCAATGAAAATGGGATTCTTGTGCTTCTCAATGCTACAAACAGCACCATTTGGTCATCATCCAACATATCAAGCAAAACAGAGAATGATCCAATTGCTCGTCTCTTGGATTCGGGAAATTTTGTAGTGAAAAATGGGGAGCAAACTAACGAGAACGGTGTATTGTGGCAGAGTTTTGATCATCCGTGTGATATATCCATGCCAGAAATGAAAATTGGATGGAACTTAGAGACTGGTGTAGAAAGATATGTATCATCTTGGACAAGCGACGATGATCCTGCTGAGGGAGAATATGCTTTGAAAATGGATCTTAGAGGCTATCCTCAACTAATTGTGTTTAAGGGACCTGATATAAAATCTAGAGCAGGGCCATTTAATGGCTTCTCTCTAGTTGCAAATCCGGTTCCAAGTCATGATACATTACCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTTTGAGCTTCTCGATAAATCAGCCTTCTTTCTGTATAAACTGAGTCCTTCAGGCACAGGGCAGAGTTTGTTTTGGACAAGTCAACTGAGAACCCGGCAAGTGGCCTCAATTGGCGACCAAGATCAATGCGAGACTTATGCATTTTGTGGTGCAAATTCTTTATGCAATTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGTTATGTTCCTAAGTCTCCTGATCAGTGGAATATATCAATTTGGGTCAATGGCTGTGTTCCAATGAATAAATCTAATTGCGAAAACAGTGATACAGATGGCTTCTTCAAGTACACACACATGAAATTGCCAGATACTTCTTCGTCATGGTTTAATGCAACCATGAACCTTGATGAATGTCGCAAGTCATGTCTTAAAAACTGTTCTTGTACAGCATATGCAAATTTAGATGTTCGTGATGGAGGAAGCGGATGTCTTCTTTGGCTTAATAATCTAGTTGACTTGAGGAGCTTCTCTGAATGGGGACAAGACTTTTATATCAGAGTGTCTGCTTCAGAATTAGATCATGCTGGCCATGGAAATGTCAAGAGAAAGATAGTAGGAATCACTGTTGGTGTGACTATTTTCGGATTAATCATCTCATGTGTATGCATATTTATAATTAAAAATCAAGGGGCTGCAAGAAAAATTTACAACAAACATTACCAAAATAGACTACTGAGGAAGGAAGACATTGATTTGCCAACTTTTGATTTGTCAGTCCTAGCTAATGCAACTGAAAACTTTTCAACTAGAAACAAGCTTGGAGAAGGTGGATTTGGACCAGTATACAAGGGCACACTAATAGACGGGAAAGAGTTAGCTGTGAAAAGGCTCTCAAAGAAGTCTGAACAAGGGTTGGATGAGTTCAAAAACGAAGTGGCGTTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAGCTTCTTGGTTGCTGCATTGACGGAGATGAAAAAATGTTGATTTATGAGTTCATGCCCAACCACAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGGAAGTTCCTAGATTGGCCAAAGCGTTTCAACATTATTAATGGCATTGCTCGAGGACTTCTATATCTTCATCAAGACTCTAGGCTGAGGATTATTCACAGAGATCTAAAAACAAGCAATGTTTTACTAGATGCAAATTTGCATCCCAAAATATCAGACTTTGGCTTGGCTCGATCATTTATAGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATACCTCCCGAGTATGCTGCACGAGGGCATTTCTCACTGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACCGAGAATTTTCAGACCCAGAGCACTACAATAATCTTCTTGGACATGCATGGAGATTATGGACTGAAGAGAGGGTGCTGGAACTACTTGATGAATTGTTAGGAGAACAATGTGCGCCCTTTGAAGTAATACGATGCATACAGGTAGGCCTATTGTGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCATCAGTGGTTTTAATGCTGAATAGTGATACATCATTGCCAAAGCCAAAGGTTCCAGGCTTTTATACTGAAATAGATGTTACATCTGATGCAAATTCTTCATCAGCAAACCAAAAACTGCACTCAGTTAATGAACTTTCCATCACAATTTTAGATGCAAGGTAG 2448 0.3967 MLFIWFCLFSYMTSTSTSLDSLAVSQSIRDGETLVSAGGITELGFFIPGNSARRYLGIWFRNVSPFTVVWVANRNTPLDNKSGVLKLNENGILVLLNATNSTIWSSSNISSKTENDPIARLLDSGNFVVKNGEQTNENGVLWQSFDHPCDISMPEMKIGWNLETGVERYVSSWTSDDDPAEGEYALKMDLRGYPQLIVFKGPDIKSRAGPFNGFSLVANPVPSHDTLPKFVFNEKEVYYEFELLDKSAFFLYKLSPSGTGQSLFWTSQLRTRQVASIGDQDQCETYAFCGANSLCNYDGNHPTCECLRGYVPKSPDQWNISIWVNGCVPMNKSNCENSDTDGFFKYTHMKLPDTSSSWFNATMNLDECRKSCLKNCSCTAYANLDVRDGGSGCLLWLNNLVDLRSFSEWGQDFYIRVSASELDHAGHGNVKRKIVGITVGVTIFGLIISCVCIFIIKNQGAARKIYNKHYQNRLLRKEDIDLPTFDLSVLANATENFSTRNKLGEGGFGPVYKGTLIDGKELAVKRLSKKSEQGLDEFKNEVALISKLQHRNLVKLLGCCIDGDEKMLIYEFMPNHSLDYFVFDETKRKFLDWPKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNVLLDANLHPKISDFGLARSFIGDQVEANTNRVAGTYGYIPPEYAARGHFSLKSDVFSYGVIVLEIVSGKKNREFSDPEHYNNLLGHAWRLWTEERVLELLDELLGEQCAPFEVIRCIQVGLLCVQQRPEDRPDMSSVVLMLNSDTSLPKPKVPGFYTEIDVTSDANSSSANQKLHSVNELSITILDAR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2133 815 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Gso6g2133 815 Pfam Domain of unknown function (DUF3403) 770 815 IPR021820 GO:0004674
Gso6g2133 815 Pfam Protein tyrosine and serine/threonine kinase 499 766 IPR001245 GO:0004672|GO:0006468
Gso6g2133 815 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Gso6g2133 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Gso6g2133 815 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 812 - -
Gso6g2133 815 CDD PAN_AP_plant 332 418 - -
Gso6g2133 815 SMART ntp_6 338 417 IPR003609 -
Gso6g2133 815 Gene3D Hepatocyte Growth Factor 334 414 - -
Gso6g2133 815 Pfam PAN-like domain 335 403 IPR003609 -
Gso6g2133 815 Pfam D-mannose binding lectin 67 173 IPR001480 -
Gso6g2133 815 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Gso6g2133 815 Pfam S-locus glycoprotein domain 207 314 IPR000858 GO:0048544
Gso6g2133 815 CDD B_lectin 25 148 IPR001480 -
Gso6g2133 815 SUPERFAMILY Protein kinase-like (PK-like) 479 768 IPR011009 -
Gso6g2133 815 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2133 815 CDD STKc_IRAK 503 769 - -
Gso6g2133 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Gso6g2133 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 179 IPR036426 -
Gso6g2133 815 SMART blect_4 25 148 IPR001480 -
Gso6g2133 815 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Gso6g2133 815 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Gso6g2133 815 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g2133 815 Gene3D - 13 145 IPR036426 -
Gso6g2133 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2133 Gso-Chr6 40647219 40651199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2133 485 815 Receptor kinase-like Gene Family AT4G23140 54.094 5.43e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso6g2133 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2133 - - gmx:100815430 1644.02