Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g2129 | ATGGCATTCACTTCTGCCCTCACATCCTTGACAACATTGGTTTGCCTCTGTATGTTTTGCGTTAATGCAACTACCCACAAAGAAATTCTGCAAACGGGACAATCATTGGGAACTTCAGATACCCTTCTTTCTTATGGTGGAAACTTCGAATTGGGTTTTTTCTCCAAAGATAACTCCACCAAGTACTACGTAGGCATATGGTATAAAAGGGTTCCAAACGACAAGATTGTGTGGGTTGCTAACAGAGACTCCCCAGTTCAAACATCCTCAGCAGTTCTGATTATTCAACCCGATGGGAACTTTATGATCATAGATGGACAAAAGACATACCGTGTGAACAAGGCATCAAACAATTTTAGCACCTATGCCACGCTTTTGGATTCTGGAAATTTGGTACTTCTGAACACCTCGAATCGAGCGATTTTGTGGCAGAGTTTTGATGATCCTACTGATACCCTAATACCTGGAATGAATCTAGGATATAATTCCGGTAACTTTCGGTCATTGAGATCATGGACAAGTGCTGATGACCCTGCCCCAGGCGAATTTTCTCTCAATTATGGTTCTGGCGCGGCCAGCCTAATCATCTACAATGGTACTGATGTGTTTTGGAGGGATGACAATTACAATGATACTTACAATGGTATGGAAGACTATTTCACTTGGTCAGTGGATAATGACTCTAGGCTGGTACTAGAAGTGTCTGGGGAGCTCATCAAGGAGAGTTGGTCGGAGGAAGCAAAGCGTTGGGTTTCTATTCGGTCATCAAAGTGTGGAACCGAAAATTCGTGTGGAGTTTTTTCCATTTGTAACCCTCAAGCACATGATCCTTGTGATTGTCTACATGGTTTCCAGCCATTGCATGCTGATTCTTGGAGGAATGGGAACACATCTGCTGGCTGTGTCCGGAAAATAGAATTGTCCTGCAGCAACAGAAGCAGTAATAATGTTAAATCCAATGATGGATTCTTCCAGTTCAATAAAGTTCAATTACCACAAACTTCTAATGGATACATCAAGCTAAAGATTGATAGAGCAAGAGAGTGTGAAAGTGCTTGCTCTAGAAATTGTTCGTGCGTTGCTTATGCTTATTATTTGAACAGTAGTATCTGCCAGTTGTGGCATGGTCAGGTATTGAGTCTAAAGAACATCTCAACATATTTGGACAATTCTGATAATACCAATCCAATTTTTTACCTCAGACTTGATGCGTCAGAATTGGTTACTGCTGATTCAAACCCAACAAATGCAACAGAACTAGCAACTGATTTTCGCAAGCATGAAAACTTGCTGAGGAATCTACTTCTGATTGTTATACTGATCTTACTTCTAGCATTTCTTATATTGGGCCTATTAGTTTATTGGACTAGAAGGCAAAGGAGAAAAGGGGAAGATTTGCTACGTTTTCATGTAAGCATGAGCATGAAAGTCGAAGATTCTGAGCTTACTGAAGCACATAGGGGTGCGAAAGTTAAGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTTGTGAGTGTTGCAGCTGCTACAAATAATTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTATATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGCTATCTCGAAGATCTGGTCAAGGATGGGAAGAGCTGAGAAATGAAGCCTTATTAATTGCAAAACTCCAGCACAATAATCTTGTTAGACTTCTAGGTTGCTGCATTGATCGAGATGAAAAGATGCTGATCTATGAATTGATGCCTAATAAAAGCCTGGATGTTTTCCTTTTTGATGCAACAAAAAGAAGGATGCTAGATTGGGGAACACGAGTTAGGATAATTGATGGGATTGCACAAGGAATCCTTTATCTTCACCAATATTCCAGGTTTCGGATCATTCATCGAGATTTAAAGGCTAGCAACATATTGTTGGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCGAGAATATTTGGTGATAATGAACTTCAAGCAAATACAAACCGTATAGTTGGAACATATGGATACATGTCCCCTGAATATGCTATGGAAGGCCTTTTCTCCATAAAATCAGACGTGTTTAGCTTTGGGGTCCTTCTGTTGGAGATTTTAAGTGGCAAGAAGAATACTGGCTTTTATCAAACAAATTCCTTCAATCTTCTTGGATACGCTTGGGATCTATGGACAAACAATTCGGGAATGGACCTGATGGATCCAGCACTGGATGATAGTGACACTACTAGTAGTAGTATGCATACAGTGCCAAGATATGTGAACATAGGACTTCTCTGTGTTCAAGAAAGTCCAGCAGATAGACCAACCATGTCTGATGTTGTATCAATGATTGGGAACGATACTGTGGCCCTTCCTTCTCCTAAACCACCTGCATTTCTAAATGTGAGAGGTAATCAAAATTCAATATTGCCCGCTAGCATGCCAGAAAGCTTTTCTTTGAATTTGATCACAGATACAATGGTGGAAGCAAGATGA | 2505 | 0.4024 | MAFTSALTSLTTLVCLCMFCVNATTHKEILQTGQSLGTSDTLLSYGGNFELGFFSKDNSTKYYVGIWYKRVPNDKIVWVANRDSPVQTSSAVLIIQPDGNFMIIDGQKTYRVNKASNNFSTYATLLDSGNLVLLNTSNRAILWQSFDDPTDTLIPGMNLGYNSGNFRSLRSWTSADDPAPGEFSLNYGSGAASLIIYNGTDVFWRDDNYNDTYNGMEDYFTWSVDNDSRLVLEVSGELIKESWSEEAKRWVSIRSSKCGTENSCGVFSICNPQAHDPCDCLHGFQPLHADSWRNGNTSAGCVRKIELSCSNRSSNNVKSNDGFFQFNKVQLPQTSNGYIKLKIDRARECESACSRNCSCVAYAYYLNSSICQLWHGQVLSLKNISTYLDNSDNTNPIFYLRLDASELVTADSNPTNATELATDFRKHENLLRNLLLIVILILLLAFLILGLLVYWTRRQRRKGEDLLRFHVSMSMKVEDSELTEAHRGAKVKKKEVKLPLFSFVSVAAATNNFSDANKLGEGGFGPVYKGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRDEKMLIYELMPNKSLDVFLFDATKRRMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGDNELQANTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEILSGKKNTGFYQTNSFNLLGYAWDLWTNNSGMDLMDPALDDSDTTSSSMHTVPRYVNIGLLCVQESPADRPTMSDVVSMIGNDTVALPSPKPPAFLNVRGNQNSILPASMPESFSLNLITDTMVEAR* | 835 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g2129 | 834 | SUPERFAMILY | Protein kinase-like (PK-like) | 496 | 786 | IPR011009 | - | |
Gso6g2129 | 834 | ProSiteProfiles | Bulb-type lectin domain profile. | 27 | 146 | IPR001480 | - | |
Gso6g2129 | 834 | PIRSF | SRK | 1 | 834 | IPR024171 | GO:0004674 | |
Gso6g2129 | 834 | ProSiteProfiles | Protein kinase domain profile. | 513 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso6g2129 | 834 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 76 | 178 | IPR036426 | - | |
Gso6g2129 | 834 | SUPERFAMILY | Hairpin loop containing domain-like | 322 | 380 | - | - | |
Gso6g2129 | 834 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 | 24 | 831 | - | - | |
Gso6g2129 | 834 | SMART | ntp_6 | 318 | 394 | IPR003609 | - | |
Gso6g2129 | 834 | Pfam | S-locus glycoprotein domain | 209 | 286 | IPR000858 | GO:0048544 | |
Gso6g2129 | 834 | CDD | STKc_IRAK | 519 | 787 | - | - | |
Gso6g2129 | 834 | SMART | serkin_6 | 513 | 787 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso6g2129 | 834 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 634 | 646 | IPR008271 | GO:0004672|GO:0006468 | |
Gso6g2129 | 834 | SMART | blect_4 | 33 | 149 | IPR001480 | - | |
Gso6g2129 | 834 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 24 | 831 | - | - | |
Gso6g2129 | 834 | Gene3D | Phosphorylase Kinase; domain 1 | 472 | 588 | - | - | |
Gso6g2129 | 834 | Pfam | D-mannose binding lectin | 76 | 172 | IPR001480 | - | |
Gso6g2129 | 834 | Pfam | Protein tyrosine and serine/threonine kinase | 517 | 786 | IPR001245 | GO:0004672|GO:0006468 | |
Gso6g2129 | 834 | CDD | B_lectin | 34 | 149 | IPR001480 | - | |
Gso6g2129 | 834 | Pfam | PAN-like domain | 318 | 380 | IPR003609 | - | |
Gso6g2129 | 834 | Gene3D | Transferase(Phosphotransferase) domain 1 | 589 | 793 | - | - | |
Gso6g2129 | 834 | Gene3D | - | 22 | 146 | IPR036426 | - | |
Gso6g2129 | 834 | CDD | PAN_AP_plant | 307 | 402 | - | - | |
Gso6g2129 | 834 | ProSiteProfiles | PAN/Apple domain profile. | 309 | 391 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g2129 | Gso-Chr6 | 40534827 | 40538798 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g2129 | 490 | 820 | Receptor kinase-like Gene Family | AT4G23250 | 57.864 | 5.16e-125 | 390 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Gso6g2129 | PK_Tyr_Ser-Thr | 6.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g2129 | - | - | gmx:100811148 | 1633.62 |