Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2127 ATGCAAGGTGCTTTTTTGCAGGCCATATTTCCTCGCATATTTGGCCACGAAGCATCAGGGATTGTTGAGAGTGTGGGACAGGGAGTGACTGAATTCAAAGAGGAGGACCATGTGCTAATAGTATTCATTGGAGAATGTATGTCATGCAGGCAGTGCACATCTGGAAAAAGCAACACTTGTGAAATTTTGGGATTGGAAAGGAGGGGTTTAATTCATAGTGATCAGAAGACACGCTTCTCATTAAAAGGGAAGCTTGTTTACAATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCTGGATGTGTTGTGAAAGTTAGCCCCCTTGCACCTCTTGAGAAAATATGTCTTCTGAGCTGTGGGGTTGTTGCAGAACTTGGTCCTTACATTAAAGAGCTCTCAAAAGCAGGAGGTGCCATACAGGAGTTTGTTAACCCGAAATATAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATATGATGGAAATGTGGCTTGCTTATGCACCCGTGAAGAATAATGCTGAGGATGCTGCTAAGGTACAACATAAATTCTAA 576 0.4149 MQGAFLQAIFPRIFGHEASGIVESVGQGVTEFKEEDHVLIVFIGECMSCRQCTSGKSNTCEILGLERRGLIHSDQKTRFSLKGKLVYNYCAVSSFSEYTVVHSGCVVKVSPLAPLEKICLLSCGVVAELGPYIKELSKAGGAIQEFVNPKYKMPAKLHLSPQLDLNMMEMWLAYAPVKNNAEDAAKVQHKF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2127 191 Gene3D - 2 127 - -
Gso6g2127 191 PANTHER ALCOHOL DEHYDROGENASE 8 134 - -
Gso6g2127 191 Pfam Alcohol dehydrogenase GroES-like domain 6 109 IPR013154 -
Gso6g2127 191 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 8 134 - -
Gso6g2127 191 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 15 29 IPR002328 GO:0008270|GO:0016491
Gso6g2127 191 SUPERFAMILY GroES-like 6 132 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2127 Gso-Chr6 40344673 40347164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2127 10 134 Monolignol Biosynthesis Gene Families AT1G72680 26.984 1.62e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2127 K00001 - gsj:114416244 389.423