Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2126 ATGGAGGAATCATCAACAACATGCGTGTTGTGCGAGAAGAGGGCAATGATGCTCTGCGACTCGGACCAGGCTAAGCTATGCTGGGAATGCGACGAGAAAGTCCACAGCGCCAATTTCTTGGTCGCGAAACATTCTAGGGTTCTTTTATGTCGTTTGTGTCACTCCCCGACTCCGTGGAAGGCTTCGGGGATGAAACTCACGCCCACTGTGTCGTTTTGTAACCGCTGCGTTGCGGAACGGAACGCGAGGTGGAACCGATTGGTGAATAATGAAAATGAACATCAACAACAGCAACAACAACAACAACAGAGTGATTTTGTGGTGGATGATGGTAGGGAATATGGTTCTGATCATGTTTTTGATGATGACGATGGTGATTATAGTGATGATAGTGGTGAAGAAGAAGAAGAGGACGAGGATGATGAAGAGGAGAATGAGAATCAAGTGGTTCCAATGTCTTCTGGTTCTGCCACGTCACCACCTAAGGTTGCCTGTTTAGCGTTGAAGCGATTGAGAAACAACTCTTTTTCTGTCGATTCTTCACATGATGAGACAGCGTGCTCTTCATCTGAGATGCTTAGTTCTACATTGCCTAGTGGTGATGAATCAACCTCTTTGAGTAGTGTATTAAAGAGGCATCGGGTTGATTAG 651 0.4593 MEESSTTCVLCEKRAMMLCDSDQAKLCWECDEKVHSANFLVAKHSRVLLCRLCHSPTPWKASGMKLTPTVSFCNRCVAERNARWNRLVNNENEHQQQQQQQQQSDFVVDDGREYGSDHVFDDDDGDYSDDSGEEEEEDEDDEEENENQVVPMSSGSATSPPKVACLALKRLRNNSFSVDSSHDETACSSSEMLSSTLPSGDESTSLSSVLKRHRVD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2126 216 Pfam B-box zinc finger 5 48 IPR000315 GO:0008270
Gso6g2126 216 MobiDBLite consensus disorder prediction 111 161 - -
Gso6g2126 216 CDD Bbox1_BBX-like 8 49 - -
Gso6g2126 216 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 184 - -
Gso6g2126 216 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Gso6g2126 216 MobiDBLite consensus disorder prediction 176 206 - -
Gso6g2126 216 MobiDBLite consensus disorder prediction 122 147 - -
Gso6g2126 216 MobiDBLite consensus disorder prediction 176 216 - -
Gso6g2126 216 SMART bboxneu5 3 49 IPR000315 GO:0008270
Gso6g2126 216 PANTHER OS08G0178800 PROTEIN 7 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2126 Gso-Chr6 40309637 40311702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2126 8 97 C2C2-CO-like Transcription Factor Family AT4G27310 58.065 4.78e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2126 - - gmx:100818267 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2126 6 40309637 40311702 Gso6g2126 6 40309637 40311702 ECH