Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2120 ATGGTGTTATCGGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTAGAGGAGATGCTCGATTCCCTTCGTCGGAGAGATGAGGAGGAGGAGAGGAAAAAGGACTCGCCGCCGGCGTTGCCCGCGAGGCCGGCCTCGCGGGCACGGCTTCCTCCGGCGCGGCGGTCGCTGCCGAACAACTTCAAGGTTAGCGGCAGCGAGCTCGCCGTCGCGCCAGAGCATGGAGCTGGGACTAACGGGGAGAATGATTTGGGGCAGAAAAGGAGAAGAAATGGTTTTGGGAGCAAGAGGGTGAATAAGGATGTGGAGTCTCCTTACGTGGAACTTTCTTCCAGTGATTCATCTGGGATGATTTGGGAATTGGAGGGTGATGATAGCGTTTCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTCTAGGCAACCAAGAGGTCAGTGGGAACTAGGAACGATACAGTCAACTTCAGGAGAGGAAGCATCCATTTCACTCTCAGATGGAAATGTTATGAAAGTGGTCAGATCAGAGATTCTGCCAGCTAATCCTGATGTTTTGGAGGGTGCGGATGATCTTAATAAACTTTGTTATTTGAACGAGCCATCGGTTCTTCACAATCTGAAGTTAAGATATTCTCAAGGAATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATCTTCAAACATATGGAAATGATTCTGTCTCAGCTTATAGGCAGAGAATTATTGATAGTCCTCATGTTTATGCTGTGGCAGATACGGCTTATAACAAGGTGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAAACAGAAACAGCTAAAATTGCATTGCAGTACTTAGCTGCTCTTGGTGGTGGTGGAAGTTGTGCGATAGAAAATGAATTTCTTCAGATAAATCGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAGTTCATTTCAGCTCCATGGGTAAAATATGTGGGGCTAAAATTCAAACCTTAATGTTAGAAAAGTCTAGAGTTGTTCAACTGGCCAATGGTGAGAGATCATATCACATATTTTATCAACTTTGTACTGGATCTTCATCTGGTCTTAAAGAGAGACTGAATCTTAGAGCAGTCAGTGAATATAAATATCTAGTTCAGAGTGACTGCACGTTAATTGATGGTGTCAATGATGCTAACAACTTTCATCAGCTGATGAAAGCGCTGGATACTGTTCAAATTTGTAAAGAAGATCAAGAGATGATCTTTAAGATGCTCGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTAGACAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTACTGCCCAGCTGATGGGTTGCAGTTCCCAGGAATTAATGACAGCATTATGTACCCTTAAAACTCAATTTGACGAGGATACTATTGCCAAAAATTTGGCATTGAGGCAGGCAACTGAAAGAAGAGATGCAATTGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACCACATACTGGGAAATCCATAAGTATCCTTGATATTTATGGGTTTCAGACTTTCCAGAAAAACAGCTTTGAACAGTTTTATATAAATTATGCCAATGAGAGGATTCAACAACATTTTAATCGGCATCTATTTAAACTTGAGCAGGAGGACTATGAATTGGATGGTGTTGATTGGACTAAGGTAGATTTTGAGGATAATGAAGGGTGCTTGGATCTTTTTGAGAAGAAACCTCACGGTCTATTCTCTTTATTGGATGAGGAGTCAAATTTAGCCAAGGCTTCTGATTTAACATTTGCCAACAAACTTAGGCACCACCTGGGTGCTAATCCTTGCTTCAAAGGAGAAAGAGGCAGAGCTTTCCGTGTTCGTCATTATGCAGGGGAGGTTCTGTATGATACAAATGACTTTCTGGAAAAAAATAGAGACACGTTGTCTTCTGATTCCATTCAATTCCTGTCATCCTGTAACTGTGAACTGCTGCAATTGCTTTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATGCAGCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAATAGTAAGGATCTTCCTGGAATTTTTGATGAAGGCCTTGTCCTACAACAGCTCAGGTGTTGTGAAGTTCTAGAAGTTGTTAGACTTTCAAGGGCTGGATATCCTATTCGAATGGGCCATCAAGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAACGTATCGCAAGATCCATTGAGCATCTCGGTTGCTGTTTTGCAAAAATTTTATATCCCTTATGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATGCACTGGAGAATAAGAGAAAACAGGTTTTTCAGGGAATACTTGAGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGTGGTTATTTCTGTGAACTTAAGAATGGAATGACAACATTACAATCATTTATTCGTGGAGAAAATACAAGAAGGAGATATGGTGTTATGGTGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGAGGTTGGCTGGTAAGAAGGGATGCTAGTCATGTAAATAGGTCTAAGAGATATCCTGAAAATGCTAAACCTAGGCGAAAGTCCTTTATGAAGATAACACCAGAAGTAAAGCAGGACTTGTCCAAAGAGCCGGTTCAGAATCTGCTTTCAGCTTTAGCAGGACTCCAAAGGCGGGTTGACAAGGCTGATGCAATTGTGGAGCAAAAGGAAGAAGAAAATACTGAATTGAGGGAACAGCTAAGACAATCTGAGAGGAAGAGGATAGAATATGAGACAAAAATGAAATCAATGGAGGAGGCTTGGCAAAAACAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTCCTGAGAATGCTACAGTTCAGCCTGTAAGACGTGATTTTGTGTTGCCTCGTGGTTATGATTCTGAAGATGCTACTTCCATGGGATCTCAAACACCTGGTGGGAGCACACCAATGCTTTCTGGTAGTCTATCTGTCTCTGATGCTGGGAGACAGGTCAATGGTACTTTGACCACAGTTGGCAATCTGATGAAGGAATTCGAGCAGCAAAGACAGAACTTTGATGATGAAGTAAAAGCTTTGAATGAGGTTAAACCGGAGCAGTCTGCCAATATGAATTCCTTTGAAGAACTTCGGAAACTTAAACAGAAATTTGAGGGATGGAAGAATCAATACAAGGTTAGATTACGCGAGACTAAAACAAGGCTTTATAAATCAGAAACGGAAAAAAGTCGGCGATCATGGTGGGGGAAGTTCAGCTCAAAAGCATAA 3528 0.4144 MVLSASPCSLARSSLEEMLDSLRRRDEEEERKKDSPPALPARPASRARLPPARRSLPNNFKVSGSELAVAPEHGAGTNGENDLGQKRRRNGFGSKRVNKDVESPYVELSSSDSSGMIWELEGDDSVSYFIKKKLRVWSRQPRGQWELGTIQSTSGEEASISLSDGNVMKVVRSEILPANPDVLEGADDLNKLCYLNEPSVLHNLKLRYSQGMIYSKAGPILIALNPFKDLQTYGNDSVSAYRQRIIDSPHVYAVADTAYNKVIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGSCAIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEVHFSSMGKICGAKIQTLMLEKSRVVQLANGERSYHIFYQLCTGSSSGLKERLNLRAVSEYKYLVQSDCTLIDGVNDANNFHQLMKALDTVQICKEDQEMIFKMLAAILWLGNISFQVDSENHIEVVDDEAVTSTAQLMGCSSQELMTALCTLKTQFDEDTIAKNLALRQATERRDAIAKFIYASLFDWLVEQVNKSLEVGKPHTGKSISILDIYGFQTFQKNSFEQFYINYANERIQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNEGCLDLFEKKPHGLFSLLDEESNLAKASDLTFANKLRHHLGANPCFKGERGRAFRVRHYAGEVLYDTNDFLEKNRDTLSSDSIQFLSSCNCELLQLLSKMFNQSQKQSVATKFKVQLFKLMQQLESTTPHFIRCIKPNSKDLPGIFDEGLVLQQLRCCEVLEVVRLSRAGYPIRMGHQEFSRRYGFLLSEANVSQDPLSISVAVLQKFYIPYEMYHVGYTKLYLRAGQIDALENKRKQVFQGILEIQKCFRGHQARGYFCELKNGMTTLQSFIRGENTRRRYGVMVKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASHVNRSKRYPENAKPRRKSFMKITPEVKQDLSKEPVQNLLSALAGLQRRVDKADAIVEQKEEENTELREQLRQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENATVQPVRRDFVLPRGYDSEDATSMGSQTPGGSTPMLSGSLSVSDAGRQVNGTLTTVGNLMKEFEQQRQNFDDEVKALNEVKPEQSANMNSFEELRKLKQKFEGWKNQYKVRLRETKTRLYKSETEKSRRSWWGKFSSKA* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2120 1175 Gene3D - 774 841 - -
Gso6g2120 1175 SMART MYSc_2a 178 841 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 ProSiteProfiles Myosin motor domain profile. 184 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 MobiDBLite consensus disorder prediction 14 96 - -
Gso6g2120 1175 SMART iq_5 864 886 IPR000048 GO:0005515
Gso6g2120 1175 SMART iq_5 901 923 IPR000048 GO:0005515
Gso6g2120 1175 SMART iq_5 841 863 IPR000048 GO:0005515
Gso6g2120 1175 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Gso6g2120 1175 CDD MYSc_Myo8 198 828 IPR036022 -
Gso6g2120 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 921 IPR027417 -
Gso6g2120 1175 PANTHER MYOSIN 131 1174 - -
Gso6g2120 1175 MobiDBLite consensus disorder prediction 17 37 - -
Gso6g2120 1175 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 131 180 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 Gene3D - 555 730 - -
Gso6g2120 1175 Coils Coil 1096 1116 - -
Gso6g2120 1175 MobiDBLite consensus disorder prediction 82 96 - -
Gso6g2120 1175 Gene3D Kinesin motor domain 184 773 IPR036961 -
Gso6g2120 1175 MobiDBLite consensus disorder prediction 1050 1074 - -
Gso6g2120 1175 Pfam IQ calmodulin-binding motif 904 920 IPR000048 GO:0005515
Gso6g2120 1175 Pfam IQ calmodulin-binding motif 869 885 IPR000048 GO:0005515
Gso6g2120 1175 ProSiteProfiles IQ motif profile. 902 930 IPR000048 GO:0005515
Gso6g2120 1175 MobiDBLite consensus disorder prediction 1056 1074 - -
Gso6g2120 1175 ProSiteProfiles IQ motif profile. 844 871 IPR000048 GO:0005515
Gso6g2120 1175 Coils Coil 12 32 - -
Gso6g2120 1175 Gene3D Myosin VI head, motor domain, U50 subdomain 425 532 - -
Gso6g2120 1175 Coils Coil 965 1013 - -
Gso6g2120 1175 Pfam Myosin head (motor domain) 187 828 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 PANTHER MYOSIN-2 ISOFORM X1 131 1174 - -
Gso6g2120 1175 PRINTS Myosin heavy chain signature 214 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 PRINTS Myosin heavy chain signature 268 293 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 PRINTS Myosin heavy chain signature 312 339 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 PRINTS Myosin heavy chain signature 543 571 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 PRINTS Myosin heavy chain signature 596 624 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso6g2120 1175 Gene3D - 846 892 - -
Gso6g2120 1175 Gene3D - 368 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2120 Gso-Chr6 40112890 40125690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2120 1 1170 Myosins gene family AT5G54280 58.761 0.0 1397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2120 K10357 - gmx:100802614 2230.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2120 6 40112890 40125690 Gso6g2120 6 40112890 40125690 ECH