Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2069 ATGTATGGCGGTGATGAAGTATCAATAATAGTGATAAACCTGGGTTCCCACACTTGCAAAGTCGGTTATGCTGGCAAAGATGCTCCCAAGGTTGTCCTTCCTTATGTTGTTGGTGCTATTGATCACATGGACATTGATGGAATTGCTGGTATTAATGATGAGAACTCTGACAAAACCAAGGGAAAATGTAAACTTTATGTAGGATCTCAATCATTAGGATACCGCAGAGACCATATGGAGGTGATGTCACCCTTGAAGAATGGAGTTGTTGTTGACTATAATATTGTATACAACATATGGGATCATGCTTTGAGGTTCCTACCTCTTAGGAAGCTCATGACGGTTCTTTTAATATGCAGCACTCCCAAAAATTAG 375 0.4 MYGGDEVSIIVINLGSHTCKVGYAGKDAPKVVLPYVVGAIDHMDIDGIAGINDENSDKTKGKCKLYVGSQSLGYRRDHMEVMSPLKNGVVVDYNIVYNIWDHALRFLPLRKLMTVLLICSTPKN* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2069 124 Pfam Actin 4 106 IPR004000 -
Gso6g2069 124 Gene3D - 3 123 - -
Gso6g2069 124 PANTHER ACTIN 2 112 IPR004000 -
Gso6g2069 124 SUPERFAMILY Actin-like ATPase domain 4 104 IPR043129 -
Gso6g2069 124 PANTHER - 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2069 Gso-Chr6 38404119 38404882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2069 1 108 Cytoskeleton Gene Families AT1G49240 30.357 3.80e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2069 K11340 - gsj:114416200 257.684