Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2017 ATGGAGTTTCAAAAACCTCTATGGCTATTCTTGCTTCTCCTCACTCTCCTCTCAAGCTCCCAAGCCAACAAATTCAACGTTGGTGGAAGCAAAGGGTGGGTTCCAAACCCTTCCGAGAGTTACAACAATTGGGCTGGAAGAAACCGATTCCAAATCAATGACACAATAGTTTTCAAGTACAATAAGGGTTCGGATTCGGTGTTGGAAGTGAAGAAGGAAGATTACGACAAGTGCAACAAGACCAACCCAATCAAAAAGTTTGAAAACGGTGACACTGAATTCAAGTTTGATCGATCAGGACCATTCTACTTCATTAGTGGAAAAGATGGGAACTGTGAAAAGGGTCAAAAATTAATCGTTGTTGTTTTGACCCCAAGAACACCACCAACACCAAAAACACCACCGTTTCCAAAAACTTCACCTTCACCTTCACCTTCACAATCTCCAAAGGCAAACCCACCAACCGTATCGCCGCCGTTACCGTCACCGTCACCATCGGTTCAACCTCCTTCAACATCCCCATCTCCGGCGAGTTCTCCTGTGCCGGCCGTCGGACATCCGGCAGTATCTCCGTCGCCGGAGTCATTTACTCCGGCGATATCTCCGGTGAACTCTACTCCGACACCGGCACCGGAGACGGGGACTCCACCGCCATCTCTTGGTCCTTCATCATCTTCACCACCGTCTCCGGGTCCTTCATCATCTTCACCGCCGTCTCCGGGTCCTTCATCATCTTCACCGCCGCCGGCGGGGCCAACTTCACCGCCGTCGTTAGCACCGTCGTCTAATTCAACTGCGCCGTCACCGAAGAACAGTGGATTTTCTGTGGCTCCTTCAAGCGTTTTGATGTATTGTGTTACAATTGTTGCTGGTGCTGCGTTGTTGCGTTATTGA 894 0.4966 MEFQKPLWLFLLLLTLLSSSQANKFNVGGSKGWVPNPSESYNNWAGRNRFQINDTIVFKYNKGSDSVLEVKKEDYDKCNKTNPIKKFENGDTEFKFDRSGPFYFISGKDGNCEKGQKLIVVVLTPRTPPTPKTPPFPKTSPSPSPSQSPKANPPTVSPPLPSPSPSVQPPSTSPSPASSPVPAVGHPAVSPSPESFTPAISPVNSTPTPAPETGTPPPSLGPSSSSPPSPGPSSSSPPSPGPSSSSPPPAGPTSPPSLAPSSNSTAPSPKNSGFSVAPSSVLMYCVTIVAGAALLRY* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2017 297 Gene3D - 21 126 IPR008972 -
Gso6g2017 297 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 295 - -
Gso6g2017 297 MobiDBLite consensus disorder prediction 194 208 - -
Gso6g2017 297 PRINTS Proline rich extensin signature 126 138 - -
Gso6g2017 297 PRINTS Proline rich extensin signature 138 159 - -
Gso6g2017 297 PRINTS Proline rich extensin signature 159 175 - -
Gso6g2017 297 PRINTS Proline rich extensin signature 191 216 - -
Gso6g2017 297 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gso6g2017 297 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gso6g2017 297 MobiDBLite consensus disorder prediction 124 276 - -
Gso6g2017 297 MobiDBLite consensus disorder prediction 209 256 - -
Gso6g2017 297 PANTHER BLUE COPPER PROTEIN 1 295 IPR039391 GO:0009055
Gso6g2017 297 MobiDBLite consensus disorder prediction 127 181 - -
Gso6g2017 297 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gso6g2017 297 CDD OsENODL1_like 24 123 IPR041846 -
Gso6g2017 297 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2017 Gso-Chr6 36108524 36109939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2017 3 206 Phytocyanin Superfamily AT5G53870 51.429 5.98e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2017 - - gmx:100795901 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2017 6 36108524 36109939 Gso6g2017 6 36108524 36109939 ECH