Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2009 ATGGTTTCCAAGACCACAATCCGTTGCAGCTCTTCTCCATTTCATGCTATAATGACACACGACGTGTTCGTGAGCTTCCGCGGTGAAGACATACACACCAGCTTCACCGGTTTTCTTTTTCAAGCTCTTGGTAGAAAATGCACTATTGTGGTCTTCTCAATCAACTATGCTTTCTCAACTATTCGAAATAAGCTACAATATGCAGAGCTTGAAGATATTGTTGAAAAGATAATAACAAATATGTTGGGTCACAAATTTTCCAGTCTTCCAAATGATGATCTAGTTGAGATGGAATCTCGTGTTGAAGAATTAGCAAAGCTTTTACGTTTGGGGTCTGTTAATGACATTCAACTTGTGGGAATTAGTAGGATGGGTGGAATAGGAAAAACAACAATTGGTCATGCTTTTTATGTAGAAATCTCTCATCAATATGATTTTTGTTGTTTTATTGATGATGTAAGCAAAATTTATCAAGATTTTGGTGTATTGGGCTTACAAAAACAATTACTTTGTGAATCTTTGAATGAAAAAAGTTTAGAGATTTGCAATCTATGCAAGGGCATGGATAGTTCTTAA 576 0.3559 MVSKTTIRCSSSPFHAIMTHDVFVSFRGEDIHTSFTGFLFQALGRKCTIVVFSINYAFSTIRNKLQYAELEDIVEKIITNMLGHKFSSLPNDDLVEMESRVEELAKLLRLGSVNDIQLVGISRMGGIGKTTIGHAFYVEISHQYDFCCFIDDVSKIYQDFGVLGLQKQLLCESLNEKSLEICNLCKGMDSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2009 191 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 87 189 IPR044974 GO:0006952
Gso6g2009 191 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 87 189 - -
Gso6g2009 191 Gene3D - 80 190 IPR027417 -
Gso6g2009 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2009 Gso-Chr6 35754234 35755439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2009 99 173 WRKY Transcription Factor Family AT5G45050 39.474 1.57e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2009 - - gsj:114416849 384.03