Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2006 ATGGAGCCATTATTTTCTTCAGCAGCAGCAATATGTGTGGTGACTGTGTTGGTAGCTGTGATTCCCATATGGGCACTGAAGATGCTGAACTCGCTGTGGCTTAGGCCAAAGAGGTTTGAAAGGCTTCTTAGAGCGCAAGGTTTTCATGGTGACCCATACTCACTTTCTCATCACAACTCCAACCAAACCCTTTTGCAACAACACCAGCTCAATTCCCAACCTTTTCCTCTATCCGATGATGTTGCTCCTCGTGTATCCTCCTTGTTACATCACACTATCGACAAATATGGCAAGAAATCCTTCTTTTGGGAAGGTAGAACACCAAAGGTGATCATTACGGACCCAAATCAACTCAAAGAAGTCTTCAACAACATTCATGACTTCCAGAAGCCAAAGTTTAGTGGCAATGTCAAGTTCTTGTTCGCTGGCCTGTTAAATTATGAGGGTGACAAGTGGGCTAAACATCGAAGAATTATGAACCCAGCATTTCACTCAGAAAAATTGAAAAATATGCTACCAGCATTTTCTCAAAGCTGCCATGATATGATTAGCATGTGGAAGGGAATGTTGTCATCAGATGGAAAATGTGAGATTGACATTTGGCCTTTCCTTCAGAATTTAACTCGTGATGTAATTTCTCAAACAGCATTTGGAAGCAGCTATGCAGAAGGAGAAAAAAATTTTCGAAATCTGAGAATGCAGGGGTATCTTTTAATGGCAGGAAAGTACAAGAACATACCAATATTGCGGCATCTACGTACAACTACCACCAAGAGGATGGAAGCAATTGAAAGAGAGATACGAGATTCAATTGAGGGTATCATAAAAAAACGAGAGAAAGCCATGGAGAATGGTGAAACCTCTAATGAAGATTTATTAAGCATACTTTTGGAATCAAATCACAAGGAAATCCAGGGACATGGAAACAGTAGGGCTGTTGGAATGACCAAGCAAGAAGTAATTGAGGAATGCAAGCTATTTTACCTGGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACAATGGTCTTATTGGCTAGGTATCCAGAATGGCAAGCACGAGCAAGGGACGAAGTTTTTCAAGTTTTTGGAAACCAAAATCCAAACATTGATGGGTTAAGTAAGCTTAAAATTGTGACCATGATTTTATACGAGGTTCTCAGGCTATATCCTCCAACAACTTTCTTTAGTCGCGCACCTCAAAAGGATGTGAAACTTGGAAATCTATCACTACCTGCAGGAATACGCATTACCATGCCAATATTATTTATTCATCATGATGGTGATATCTGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTTCTGAAGGAATTGCTAAGGCAACAAAAGGCCAAATTTCGTTTTATCCATTTGGATGGGGTCCTAGAATATGCATTGGCCAAAACTTTGCCTTAATGGAAGCAAAGATAGTGTTATCATTGCTTCTGCAACATTTCTCATTTGAGCTTTCTCCGGTCTATGAACATGCTCCAACGGTTGTGCTTAGTTTGCAGCCAAAACGTGGGGCACACATCGTTTTGCATAAACTATGA 1563 0.4082 MEPLFSSAAAICVVTVLVAVIPIWALKMLNSLWLRPKRFERLLRAQGFHGDPYSLSHHNSNQTLLQQHQLNSQPFPLSDDVAPRVSSLLHHTIDKYGKKSFFWEGRTPKVIITDPNQLKEVFNNIHDFQKPKFSGNVKFLFAGLLNYEGDKWAKHRRIMNPAFHSEKLKNMLPAFSQSCHDMISMWKGMLSSDGKCEIDIWPFLQNLTRDVISQTAFGSSYAEGEKNFRNLRMQGYLLMAGKYKNIPILRHLRTTTTKRMEAIEREIRDSIEGIIKKREKAMENGETSNEDLLSILLESNHKEIQGHGNSRAVGMTKQEVIEECKLFYLAGQETTSSLLVWTMVLLARYPEWQARARDEVFQVFGNQNPNIDGLSKLKIVTMILYEVLRLYPPTTFFSRAPQKDVKLGNLSLPAGIRITMPILFIHHDGDIWGDDAKEFKPERFSEGIAKATKGQISFYPFGWGPRICIGQNFALMEAKIVLSLLLQHFSFELSPVYEHAPTVVLSLQPKRGAHIVLHKL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2006 520 Gene3D Cytochrome P450 67 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 516 - -
Gso6g2006 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gso6g2006 520 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 12 516 - -
Gso6g2006 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 Pfam Cytochrome P450 89 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g2006 520 SUPERFAMILY Cytochrome P450 87 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2006 Gso-Chr6 35560089 35564164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2006 8 520 Cytochrome P450 AT3G14690 49.320 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2006 - K17873 gmx:100790445 1051.2