Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2005 ATGGTGGGCTCAGGAACAACAACAACAAAAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGTGTGTGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTGAGAGGTGGCAATGGGTGCAAGGTTGGGGATGAAAACGGCAGCTTAATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGGTCTTCAAAGAGCCTACGGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGTTCCTTTGATGCTCTTCCTCCTGAATGGATAGATCAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATCCCTGAAGACCTCCATTTTGTGCTAAGAATGAGGCACACTTTTGAATCTCTAGGCTATCAATCAGGGTTCTACCTCTCCCAACTCTTCTCTTCAACAAGGAGCACATCCTCTTCCACTTCCATTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCCCCTCCACTCCTCAACTGGGGTCAGAGGCCACTTGAATCTTCCGCTTCTATGCTATCCTCTCCTAGCTTTCAACATGCAGCAGCCAGAATGGGGTTCCCACAGGCCAAAGATGAGACTCATATGTTCCTCATGCCTAATGCATCATCAGAGCAGCTTGCAAGAATGGGAGACATCATGGGGGAGCATGAAAATGACATAAAGTGGCCAAATGGCCTATCCATCTTCAATGCACTCACTGGAAGATCTGATGATGCCAAACTCTTGTTCAATCAAGATAGCTTGGGAGCCAAACCAAGTAGTGATCACAATCACCGCCACACTCTCAACCCTAATCCAAATGCTGGTAGTGTAGCAAACCCAAATGAGTTCTTGAGCTTGGATGGTCACACTGAAGGAAGAGGAGGGGCAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCTGCCAGAATAATGACTTCATCTTCATCTTCTACTTCAATGGATCACCATCAACAACAAGCAGGTGTGGAGTATAGGAATTCAGAAGGTAGTATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1263 0.46 MVGSGTTTTKTDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDENGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSIPSKPSTIPIRPPPPLLNWGQRPLESSASMLSSPSFQHAAARMGFPQAKDETHMFLMPNASSEQLARMGDIMGEHENDIKWPNGLSIFNALTGRSDDAKLLFNQDSLGAKPSSDHNHRHTLNPNPNAGSVANPNEFLSLDGHTEGRGGARKVDKFKRCFTLPARIMTSSSSSTSMDHHQQQAGVEYRNSEGSMYQDVMETFLE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2005 420 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 92 191 IPR025610 -
Gso6g2005 420 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 23 77 IPR025610 -
Gso6g2005 420 PANTHER GB|AAF34833.1 1 420 IPR044170 -
Gso6g2005 420 MobiDBLite consensus disorder prediction 322 365 - -
Gso6g2005 420 MobiDBLite consensus disorder prediction 211 233 - -
Gso6g2005 420 MobiDBLite consensus disorder prediction 335 350 - -
Gso6g2005 420 PANTHER GB|AAF34833.1 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2005 Gso-Chr6 35517703 35521624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2005 24 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.977 2.27e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2005 - - gmx:100789006 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2005 6 35517703 35521624 Gso6g2005 6 35517703 35521624 ECH