Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2003 ATGACGGGCAGGGAAATTTTTCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCTGGTAAAGGAAAGAGCAAGATGAAGAAGAACATAACTCATGGCTTTCACTTGGTAAAGGGGAGATCAGGTCATGCCATGGAAGACTATCTTGTTGCTCAATTCAAGCAAGTTGACGACAATGAATTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTTAAGAGAGCATATGGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCGGTTACTGCAATATTGATCAACTGTCAGGAGCTGCTAGTGGCCAATATTGGGGATTCCCGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTATCAGTGGATCATGAACCAAGCATAGAAAGTGAAGATATAAGAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGATGTTCCACGTGTCGATGGTCAGTTGGCGGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCATATGTAACTTTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAGTGCTATCAAAGATGTTAAGGATGCCAGGTCCGCAGCTAAGGTGCTTACCGAAGAAGCAAAGATCAGGAAAAGTTCTGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA 849 0.4193 MTGREIFHKMKEKVLGSSDPDSGKGKSKMKKNITHGFHLVKGRSGHAMEDYLVAQFKQVDDNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPAEAVKRAYGITDSTILDKSGELGRGGSTAVTAILINCQELLVANIGDSRAVLCKNGVAKQLSVDHEPSIESEDIRNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPYVTLEMIEDDAEFLILASDGLWKVMSNQEAVSAIKDVKDARSAAKVLTEEAKIRKSSDDISCVVVKFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2003 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Gso6g2003 282 Gene3D - 28 282 IPR036457 -
Gso6g2003 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Gso6g2003 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Gso6g2003 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Gso6g2003 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Gso6g2003 282 CDD PP2Cc 35 281 IPR001932 -
Gso6g2003 282 SMART PP2C_4 24 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2003 Gso-Chr6 35464007 35468446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2003 1 282 PP2C-type Phosphatase Gene Family AT3G15260 77.163 4.00e-166 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2003 K17506 - gmx:100789914 541.191