Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1957 ATGGAAAACAACAATATTCAACCATGCCATGATGACCTTGATCGTAGAGAAGCCAACAACCCTCCAAAGATGTTAAACTTGGAGGTGGAAGGACAGAGAGAGGGTTTTGACTATGCAAAGAGACCAAAATGGCTTAGAGCTGCTGTTTTGGGTGCCAATGATGGTTTTGTCTCAACAACATCCCTCATGATGGGAGTTGGAGGTGTGAGGAAAGATGTTAAGAGTATGCTGCTGACTGGGGTTGCAGGGATGGTGGCTGGAGTATGCAGCTTGGCCATTGGAGACTTTGTTTTTGTTTACTCACAATATGCTATTGGTATAGGGGTGCAACTACTTGGTGCTGCCTTTTTCAATACCTATAAGGCAAGGTTAGGGGTGGTGGTAGCTGTTGTCACCCTTGCTTTGATCATCTTTGGAGATTTGGGGGCCTTTTTAGGGAAAGCACCCAGGGTTAAGTCCACTTTGAGGGTTTTGATTGGAGGGTTGTTGGCCATGGCTATTACTTTTTCTTTAACTAATGTTGTTGGATCAAGTGGCCTTTGA 543 0.4475 MENNNIQPCHDDLDRREANNPPKMLNLEVEGQREGFDYAKRPKWLRAAVLGANDGFVSTTSLMMGVGGVRKDVKSMLLTGVAGMVAGVCSLAIGDFVFVYSQYAIGIGVQLLGAAFFNTYKARLGVVVAVVTLALIIFGDLGAFLGKAPRVKSTLRVLIGGLLAMAITFSLTNVVGSSGL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1957 180 Pfam VIT family 45 102 IPR008217 GO:0005384|GO:0030026
Gso6g1957 180 Pfam VIT family 101 171 IPR008217 GO:0005384|GO:0030026
Gso6g1957 180 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g1957 180 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 103 177 IPR008217 GO:0005384|GO:0030026
Gso6g1957 180 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 106 IPR008217 GO:0005384|GO:0030026
Gso6g1957 180 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 10 106 - -
Gso6g1957 180 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 103 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1957 Gso-Chr6 33428227 33433118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1957 17 180 Nodulin-like Gene Family AT3G43660 54.774 7.17e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1957 K22736 - gmx:113001873 347.821