Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1875 ATGATTGATAGCAATAACAATGTCAACATGAGCCACCACAATCCTAATTTCACAGGAACAAAGGAAGTTGTTGTTGAAGACGAGGAATCACCATTGTTGGCGTTGCCACTGCTAAGAAACAGAGAGGAAGATGAACAAGGGTCAGGGTCAAAGGCATCGGTTACTGGTTCTGTGTTCAATCTCTCAACAACCATCATCGGCGCCGGAATCATGGCCTTACCTGCAGCCATCAAAGTCGTCGGCGTCGGCGTCGGTGTCGTCGCCATCGTTTTCCTCGCCTTCCTAACACACACCTCTCTGGAGATTCTCCTCAGATTCACCAGAGTTGCCAAGGCTTCCACCTACGCCAACCTCATGGGTGATGCCTTTGGGAGTTCTGGGACATTGCTGTTTCACCTCTCTGTACTTATCAACAACTTTGGGATACTTGTTGTCTACGTTATCATAATTGGCGATGTCTTGTCCGGAACATCATCGAGTGGTGTTCATCATTTTGGGGTACTTGAAGGGTGGTTTGGTCAGTGCTGGTGGACTGCACGTACTTTTGTTCTTCTTCTCACAACCCTCTTCGTGTTTGCTCCATTGGGGTTCTTTAAGAGGATAGATTCATTGAGACATACTTCTGCCTTAGCTGTGGCTCTGGCTATTGTGTTTCTACTCATAACTGCTGGAATTACATTCGTCAAATTGTTAAATGGCAGTATAGCTAGTCCGAGGTTGCTTCCTAATATTACTGATGTTACATCCATATGGAATCTCTTTACAGCAGTTCCAGTTCTTGTGACAGCTTTTGTTTGTCACTACAATGTGCATACAATAGACAATGAGTTAGGAGACCCTTCCCTGATGCAACCAGTTATACGTGCATCGCTGGTCCTGTGTTCTAGCATTTACATTCTTACAGCATTATTTGGATTTCTCCTATTTGGTGAGTCAACACTTGATGATGTGCTGGCCAACTTTGATACTGATCTGGGCATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTATGCCCTCCACCTCATGCTTGTTTTTCCAGTTATCTTCTTCTCACTGCGCTTCAATTTGGACGATCTTATCTTTCCTTCAGCTAGGCCCTTGGATTTGGATAAGTGTAGGTTTGTCTTGATCACCACTGGACTCATTGCTTTAATCTATGTGGCTGCAAATTTTGTACCTAGCATCTGGGATGCATTTCAATTCACAGGAGCAACTGCCACCGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTGCTCTTAGGGATCCCCATGGCATTGCAACAAAGAAGGACAAGATTTTATCCATTGTCATGATTTTTCTGGCTGTGTTCTCAAACGTTGTGGCTATATACAGTAATGCTGATGCCATGTTCAGAAAACATGTGGATCCTCACCAATGA 1413 0.443 MIDSNNNVNMSHHNPNFTGTKEVVVEDEESPLLALPLLRNREEDEQGSGSKASVTGSVFNLSTTIIGAGIMALPAAIKVVGVGVGVVAIVFLAFLTHTSLEILLRFTRVAKASTYANLMGDAFGSSGTLLFHLSVLINNFGILVVYVIIIGDVLSGTSSSGVHHFGVLEGWFGQCWWTARTFVLLLTTLFVFAPLGFFKRIDSLRHTSALAVALAIVFLLITAGITFVKLLNGSIASPRLLPNITDVTSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDPSLMQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARPLDLDKCRFVLITTGLIALIYVAANFVPSIWDAFQFTGATATVCLGFIFPAAIALRDPHGIATKKDKILSIVMIFLAVFSNVVAIYSNADAMFRKHVDPHQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1875 470 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 468 - -
Gso6g1875 470 PANTHER AMINO ACID TRANSPORTER 23 468 - -
Gso6g1875 470 Pfam Transmembrane amino acid transporter protein 51 457 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1875 Gso-Chr6 27024941 27036365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1875 33 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.989 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1875 K14207 - gmx:100778699 882.093