Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1835 ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTAAGAATCGGCAAAGAGGCGATGGAAAGCGGCGATCGGTCACGCGCTTTGAAGTTCGTGACGAAGGCGCGTCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGTGGATGCAGGGGATCAGGCCCCCGCCGCCGAGGCGGAGGGCCCCACGAAGCCCACTGATCAACCTTCTATCCGCCGGAGGGCCACCGGGGCGGCTGCGACCGTCTCGGCCGGGCCCTCGTCGGCCTCGTCCTCTTCGGCCTCGTACACCGAAGAGCAAGTCTCAATTATTAGGGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTTGAGGATGTGAGGAAATCGTACAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCCTGGTGCCGAGGAAGCATTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAGAAAGTATGATGTTTCGGGTGAGGATGAAGCGGTTTACGAGCAGCGTGCGGCAAGGCCGGCGGCCCGAGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTCAGGAACTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGGTTCAATGGTCATAGGCATGCTGCTGATCATGGTTCTGGTGGTTTTAATGTTCGCGCTTTAATTCAGTTGCTGCCTGTGCTGCTGATTGTGTTATTGAACTTTTTGCCTTCATCGGAGCCCTTGTACTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGGGTGTTAACTATTATGTCAAGTCTACAAACTTTGTTCAGGAGTATCCGTTGGGGAGTGATGAACGATCAAAAATTGAAGAGAGGGTAGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTCGAGTTGCAGCGTCGCCAATGGGGGTATATCCGGGAAACACCCCATTGTGATATGTTGCGGAAGTTTGAGGTGGTGAATTGA 1095 0.505 MDGNKDDALKCLRIGKEAMESGDRSRALKFVTKARRLDPTLPVDDLLSTIEVDAGDQAPAAEAEGPTKPTDQPSIRRRATGAAATVSAGPSSASSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFGGMAPAANFGGFSFGPAGFNGFNGHRHAADHGSGGFNVRALIQLLPVLLIVLLNFLPSSEPLYSLSKSYPYEHRFTTPKGVNYYVKSTNFVQEYPLGSDERSKIEERVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1835 364 ProSiteProfiles dnaJ domain profile. 116 180 IPR001623 -
Gso6g1835 364 CDD DnaJ 116 169 IPR001623 -
Gso6g1835 364 SMART dnaj_3 115 172 IPR001623 -
Gso6g1835 364 Pfam Domain of unknown function (DUF1977) 273 344 IPR015399 -
Gso6g1835 364 PANTHER - 1 362 - -
Gso6g1835 364 MobiDBLite consensus disorder prediction 85 100 - -
Gso6g1835 364 PANTHER AT29763P-RELATED 1 362 - -
Gso6g1835 364 PRINTS DnaJ domain signature 118 136 IPR001623 -
Gso6g1835 364 PRINTS DnaJ domain signature 136 151 IPR001623 -
Gso6g1835 364 PRINTS DnaJ domain signature 152 172 IPR001623 -
Gso6g1835 364 ProSitePatterns Nt-dnaJ domain signature. 157 176 IPR018253 -
Gso6g1835 364 Gene3D DnaJ domain 112 225 IPR036869 -
Gso6g1835 364 MobiDBLite consensus disorder prediction 56 100 - -
Gso6g1835 364 SUPERFAMILY Chaperone J-domain 68 176 IPR036869 -
Gso6g1835 364 Pfam DnaJ domain 116 177 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1835 Gso-Chr6 22789987 22791747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1835 111 177 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.19e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1835 K09518 - gmx:100793797 673.7