Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1825 ATGGGAACCTCTGCGAACGCTGTCGCAGGTGGTCGTGGCGGCGCCCCTGTCCCCAAAGACGTCGACTACGCTAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGACCGCGTTCGCATGGACGCTTACTTCGACGCCATTTTTCAAAACAAACGCCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCGGCACAAGCGGGTGCGAGGAAGGTGTATGCAGTGGAAGCAACCAAGATGTCAGAACATGCGCGTGCACTTGTCAAAGCGAATAATCTCCAGGATGTAGTTGAGGTCATTGAGGGATCGATGGAGGAAATTACCTTGCCAGAGAAAGTTGATGTGATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATAAATGCTCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCCGGACTGGGATAGTAGATCACAAATTGGGCGATTACGAGTCGACTATGGATGATTGGCACCACTTTGTTGATGAAACAAAAACCTACTATGGTGTTGATATGAGCACTTTAACGAGGCCTTTTTCGGAGGAGCAGAGAAAATACTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAAGTCGTAGGAACTGCTGGTATAATAAAGGAAATTGATTGTTTAACTGCCACGGTGGCTGACATAGAGAAAGTCAGATCAGATTTTTCAATGTCAATAACCGTGGATAACACAAAGTTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTGAACAAGAGATTGAGTTAACCACAGCTCCCAGTGTAAATTATGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCATGCATCTGAGTGAAGGTGATGATTTAAGGGTTTCTTTTCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCTGGCAAGCTACTTGCACCTTTCAAAAATAAGTACTACATTGAATAA 1125 0.4542 MGTSANAVAGGRGGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFDAIFQNKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQDVVEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVINARDRWLKPTGVMYPSHARMWMAPIRTGIVDHKLGDYESTMDDWHHFVDETKTYYGVDMSTLTRPFSEEQRKYYLQTSLWNNLHPHQVVGTAGIIKEIDCLTATVADIEKVRSDFSMSITVDNTKLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSVNYGTHWGQQVFLLHPPMHLSEGDDLRVSFLMSRSKENHRLMEVELGCEIHQHSGKLLAPFKNKYYIE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1825 374 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 134 - -
Gso6g1825 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 362 - -
Gso6g1825 374 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Gso6g1825 374 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 351 IPR025799 GO:0016274|GO:0018216
Gso6g1825 374 CDD AdoMet_MTases 64 164 - -
Gso6g1825 374 Gene3D - 167 374 - -
Gso6g1825 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 362 IPR025799 GO:0016274|GO:0018216
Gso6g1825 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1825 Gso-Chr6 22339015 22346383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1825 25 333 C2H2 Transcription Factor Family AT3G12270 32.239 4.63e-42 153