Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1821 ATGATGATGGAAGAGTTTAAGATTCTTTTTGTCTTTCTCATGACTTTGCTACTTGTGCTCAAGGTCACAATCTCGCTCTGGTGGAGACCAAGGAAAATTGAGGGCCATTTCTCCAACCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGGAATGTGAAAGAACTCGTGGGAATGATGATGAAAGCTTCCGAAAAACCCATGCCTTTCTCTCACAACATTCTCCCAAGAGTGCTTTCTTTCTACCACCACTGGAAGAAAATTTACGGTGCAACATTCCTTGTATGGTTTGGACCCACTGTTCGAGTCACCATCTCTGATCCAGACCTCATCCGGGAAATCTTCACCTCCAAGTCAGAATTATATGAGAAAAACGAATCTCCCCCACTTGTGAAGCAGCTTGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAAAATCATCTCTCCCACCTTTCATATGGAAAACCTCAAAATGTTGATACCGATTATGGCAACAAGCGTGGTTGAGATGTTGGAGAAGTGGAAGGCAATGGCAGAGGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGTTTTCAAACCTTAACAGAAGATGTCATTACTAGGACAGCGTTTGGGAGCAGCTACGAAGATGGCAAAGCCGTTTTTCGGTTACAAGCCCAACAAATGGTCCTAGCAGCTGATGCCTTCCAGAAAGTGTTCATTCCAGGTTATAGATTCTTCCCCACGAGGAGGAATATAAATTCTTGGAAACTGGACAAGGAAATCAAGAAATCGTTGGTGAAGATCATCGAACGACGAAGAAAAGAGAATGCGTGTGGGAAAGAAGAAACAAAAAGGCCAACGGATTTGCTGGGGCTCATGATTTGGGCTTCCAACAACAACAACAACACCACCTCCAATGTGAACGTAACGGTGGATGACATAGTGGAAGAGTGCAAAACCTTTTTCTTCGCAGGCAAACACACCACTTCGAATTTGCTAACGTGGACCACGATCCTGCTCGCGATGCATCCGCAGTGGCAGATACGGGCACGTGAGGAGCTCGTGAGTGTGTGCGGTGCACGTCACATCCCCACCAAGGAGGATCTTGCCAAGCTTAAGACACTGAGCATGATCGTGAACGAGTCTCTGAGGCTCTACCCTCCCACAATCGCGACCATTAGAAGAACAAAAGCCGACGTGGAGCTAGGGCCGTACAAGATCCCGTGCGGGACGGAGCTCCTGATCCCCATCCTGGCCGTGCACCACGACCAGGCCACGTGGGGCAGCAACGCGACCGAGTTCAACCCGGGTCGCTTCTCGAACGGCGTGTCCCGCGCCGCGCGCCTCCCTTTCGCCTTCATCCCCTTCGGCCTCGGCGCCCGCACCTGCATCGGCCAGAACCTCGCACTTCTCCAGACCAAACTCACCCTCGCCGTCATGGTTCGAGGTTTCAACTTCAGGCTGGCGCCGACTTATCAACACGCGCCAACGGTTCTCATGCTGCTCTACCCTCAATATGGTGCACCAATCCGTTTCCAACCAATACCCGCACCCACTGTGAATTGTTACTGA 1581 0.5009 MMMEEFKILFVFLMTLLLVLKVTISLWWRPRKIEGHFSNQGIRGPPYRFFIGNVKELVGMMMKASEKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRVTISDPDLIREIFTSKSELYEKNESPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKMLIPIMATSVVEMLEKWKAMAEEKGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNINSWKLDKEIKKSLVKIIERRRKENACGKEETKRPTDLLGLMIWASNNNNNTTSNVNVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHPQWQIRAREELVSVCGARHIPTKEDLAKLKTLSMIVNESLRLYPPTIATIRRTKADVELGPYKIPCGTELLIPILAVHHDQATWGSNATEFNPGRFSNGVSRAARLPFAFIPFGLGARTCIGQNLALLQTKLTLAVMVRGFNFRLAPTYQHAPTVLMLLYPQYGAPIRFQPIPAPTVNCY* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1821 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gso6g1821 526 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 513 - -
Gso6g1821 526 Pfam Cytochrome P450 80 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PANTHER CYTOCHROMEA2 8 513 - -
Gso6g1821 526 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1821 526 SUPERFAMILY Cytochrome P450 71 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1821 Gso-Chr6 22248180 22254211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1821 7 516 Cytochrome P450 AT2G26710 73.489 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1821 K15639 - gmx:100786200 1030.01