Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1810 ATGGCACAAAAGCCATCACAAATCTTTTTTAAAACCCATCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGTTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCGAGTGCTCCCTGGCTCCTAGCTGCTCAAATTTGAAAAAGGTGCAAAGAAGCATACAGGATAAGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGTGTTTTTCATGATTTACTCAAGCCATCATCTTCTATACCCGAAACCTCAATAATGATTAATAATTTACCTATAACAAACATGCCTAACGACAAAGATACGTTGAACATTGACCTTGCTCTATGTAATTCGGATCAAACAGATATAAGACTTTGTGATGATGTTAAGCAACAGAACCACCGTGGCAGCAAAAGCAAAATTGAAGAATATGTAACTCCTCTAGTTAAAGATCCTGACTTCATCATGCCATTAGCTGAAGCAGTTGCCCACTCCCTCAAGAGCCAGACTTATAAGCAAGTGGGTCTTAACCTGAATTTGGGTCTTCCAGAACCTCATTTGTGA 582 0.3935 MAQKPSQIFFKTHPKDNSLMVKDGYQWKKYGQKKVTKDNPSPRAYFECSLAPSCSNLKKVQRSIQDKSILVATYEGKHNHGVFHDLLKPSSSIPETSIMINNLPITNMPNDKDTLNIDLALCNSDQTDIRLCDDVKQQNHRGSKSKIEEYVTPLVKDPDFIMPLAEAVAHSLKSQTYKQVGLNLNLGLPEPHL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1810 193 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 173 IPR044810 GO:0003700
Gso6g1810 193 ProSiteProfiles WRKY domain profile. 16 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1810 193 PANTHER WRKY TRANSCRIPTION FACTOR 49 1 173 - -
Gso6g1810 193 SUPERFAMILY WRKY DNA-binding domain 17 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1810 193 SMART WRKY_cls 21 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1810 193 Gene3D WRKY domain 6 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1810 193 Pfam WRKY DNA -binding domain 22 80 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1810 Gso-Chr6 21633331 21634218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1810 3 179 WRKY Transcription Factor Family AT1G80840 39.572 2.23e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso6g1810 WRKY 3.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1810 - - gsj:114415992 398.282