Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1809 ATGTCCATATACATGCAATTTTCAAATGGTGTAGAAGAGACCTTCCTTAGAGCCCTCAAGCTACTATTGTGGGCTCATTTTCCCTATATTCTTTTCGGGCTGATGTTGGAGAGTAACAACCAAGCTAAGATGGAGAATCTTGTGTTAAGCACTAGAAGTGGTGTTAATGGTTTCACCCTTGATCCATCTCTTGGGGAAATCATTATAACTCACCTTGACATCAAAATTCCAAAGAAAGGAAAGATTTATTCAATGAATGAAGGAAATGCTAAAAATTGGGACGACCTACTACCAAGACGACCTACTACCAAGTATATGGAGAACTGCAAGTATCCAAAAGATGGTTCATCACCAAAGTCCCTAAGATATATTGGAAGCATGGTAGCTAATGTTCACTGCACATTGCTTTATGGAGGTATTTTTTTGTACCCAGTTGATAAAAAGAGTCCAAAAGGAAAACTTCGTGTACTCTATGGAGTCTTCCCAATGTCGTTCTTGATGGAACAAGCAGGAGGACATGCTTTCACTGGCAACCAAAGGATGTTAGATTGTAGTGAAGCAGAGCAGAGCAAAGCGGCAATATTTGTTTTTGGCTTGGACTTGTTGGGTTATGACATGGATTGGGATACGAGCGGTGAAGCCCCTGCAATACAATATAGGGATGACATTTAG 672 0.4033 MSIYMQFSNGVEETFLRALKLLLWAHFPYILFGLMLESNNQAKMENLVLSTRSGVNGFTLDPSLGEIIITHLDIKIPKKGKIYSMNEGNAKNWDDLLPRRPTTKYMENCKYPKDGSSPKSLRYIGSMVANVHCTLLYGGIFLYPVDKKSPKGKLRVLYGVFPMSFLMEQAGGHAFTGNQRMLDCSEAEQSKAAIFVFGLDLLGYDMDWDTSGEAPAIQYRDDI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1809 223 SUPERFAMILY Carbohydrate phosphatase 46 185 - -
Gso6g1809 223 Gene3D - 74 201 - -
Gso6g1809 223 PRINTS Fructose-1,6-bisphosphatase signature 57 80 IPR028343 GO:0042132
Gso6g1809 223 PRINTS Fructose-1,6-bisphosphatase signature 83 110 IPR028343 GO:0042132
Gso6g1809 223 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 76 198 IPR044015 -
Gso6g1809 223 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 46 196 - -
Gso6g1809 223 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 46 196 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1809 Gso-Chr6 21588420 21597636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1809 12 44 C2C2-YABBY Transcription Factor Family AT2G26580 63.636 7.11e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1809 K03841 - gmx:100812684 239.195