Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1797 ATGGCATTCCATTTGGAAATTATCATGCTCATTCTCATCTTCATCGCTCTTGCGCAGCCGAGTGAGCGAGTCAACGCGGAGCCGACTCAGGACAAACAAGCCCTCCTCGCATTCCTCTCCCAGACCCCGCACGCGAACCGGGTCCAGTGGAACACCTCCAGTTCGGCCTGCGACTCCTGGTTCGGCGTCCAATGCGACTCGAACCGCTCCTTCGTGACTTCCCTCCACCTCCCCGCCGCCGGCCTCGTGGGCCCCATCCCTCCCAACACCATCTCCCGCCTCACGCGCCTCCGCGTCCTCAGCCTCCGCTCCAACGCGCTCGTGGGCCCCATCCCCTTCGACTTCGCCAACCTCACCTCCCTCCGCAACCTCTACCTCCAGAACAACCACCTCTCGGGCGAGTTCCCCACAACCCTAACTCGCCTGACTCGCTTGACTCGCCTCGAACTCTCCTCCAACAATTTCACAGGACCAATCCCTTTCTCCCTCAACAACCTCACTCGCTTAACCGGCCTCTTCCTAGAAAACAATTCCTTCTCGGGTAGCCTCCCCAGCATTACGTTAAAGTTAGTTAACTTCAATGTCTCCAATAACCGCCTCAACGGCTCCATCCCCAAAACCTTATCGAATTTCCCCGCGACCTCGTTTTCAGGAAACAACGATCTCTGCGGGAAGCCATTACAACCATGCACACCCTTCTTTCCAGCCCCAGCCCCAGCCCCTTCTCCTGTGGAACAACAACAGCATAACTCCAAAAGGCTTTCTATCGCTGCCATTGTTGGAATTGCCGTCGGGTCTGCTTTGTTTATACTGTTATTGCTATTAATTATGTTTCTATGCTGCCGGCGGAGGAGGAGGAGGAGGAGAGCGGCTAAGCCGCCACAGGCTGTGGCGGCGGTAGCGCGTGGGGGGCCCACAGAGGGCGGAACGTCGTCGTCGAAGGACGATATTACGGGGTCAGTGGAGGCTGCTGAGAGGAACAAGCTGGTGTTTATGGAGGGTGGAGTGTACGGATTTGGGTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTATTGGGAAAAGGGAGCATGGGGACTTCTTATAAGGCGATTCTGGAGGACGGGACCACGGTGGTTGTGAAGAGGTTGAAGGACGTGGCGGCTGCGAAGAGAGAGTTCGAGGCGCGAATGGAGGTTGTTGGGAACGTTAAGCACGAGAATGTGGTTCCTCTCAGAGCGTTTTACTACTCCAAGGATGAGAAGTTGCTCGTCTACGATTACATGGCCGCCGGCAGCTTGTCTGCACTTCTTCACGGAAGCAGAGGGTCAGGGCGAACCCCGTTGGATTGGGACACCCGAATGAAAATAGCACTGGGAGCTGCAAGAGGCCTCGCCTGCCTCCACGTGTCAGGAAAACTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCCACCCGACCCACGAAGCCTGTGTTTCAGACTTCGGGCTCAACCCGATATTTGCCAACCCGGTTCCCTCAAACCGAGTTGCCGGTTACCGGGCACCAGAGGTTCAGGAAACCAAAAAAATCACTTTCAAATCCGACGTCTATAGCTTTGGCGTCTTGATGCTGGAACTTTTAACAGGTAAGGCACCAAACCAAGCCTCGCTGAGCGAGGAAGGGATCGACCTACCACGATGGGTGCAGTCCGTGGTTCGCGAAGAATGGACCGCTGAAGTGTTCGATGCGGAACTGATGAGGTACCACAACATTGAGGAGGAGATGGTTCAGTTGTTGCAGATTGCGATGACGTGCGTTTCGCTCGTGCCGGATCAGAGGCCCAACATGGATGAGGTGGTGCACATGATCCAGGATATTAGCCGAAGCGAGACCACCGATGACGGCTTACGCCAATCGTCCGATGATCCTTCTAAAGGATCGGACGGTCACACGCCCCCGCAGGACGCTAGGACTACCCCTAGGTCGGACACGTCGTAG 1962 0.5607 MAFHLEIIMLILIFIALAQPSERVNAEPTQDKQALLAFLSQTPHANRVQWNTSSSACDSWFGVQCDSNRSFVTSLHLPAAGLVGPIPPNTISRLTRLRVLSLRSNALVGPIPFDFANLTSLRNLYLQNNHLSGEFPTTLTRLTRLTRLELSSNNFTGPIPFSLNNLTRLTGLFLENNSFSGSLPSITLKLVNFNVSNNRLNGSIPKTLSNFPATSFSGNNDLCGKPLQPCTPFFPAPAPAPSPVEQQQHNSKRLSIAAIVGIAVGSALFILLLLLIMFLCCRRRRRRRRAAKPPQAVAAVARGGPTEGGTSSSKDDITGSVEAAERNKLVFMEGGVYGFGLEDLLRASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAAAKREFEARMEVVGNVKHENVVPLRAFYYSKDEKLLVYDYMAAGSLSALLHGSRGSGRTPLDWDTRMKIALGAARGLACLHVSGKLVHGNIKSSNILLHPTHEACVSDFGLNPIFANPVPSNRVAGYRAPEVQETKKITFKSDVYSFGVLMLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMTCVSLVPDQRPNMDEVVHMIQDISRSETTDDGLRQSSDDPSKGSDGHTPPQDARTTPRSDTS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1797 653 MobiDBLite consensus disorder prediction 291 318 - -
Gso6g1797 653 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Gso6g1797 653 MobiDBLite consensus disorder prediction 615 653 - -
Gso6g1797 653 SUPERFAMILY Protein kinase-like (PK-like) 350 611 IPR011009 -
Gso6g1797 653 SUPERFAMILY L domain-like 33 230 - -
Gso6g1797 653 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Gso6g1797 653 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Gso6g1797 653 ProSiteProfiles Protein kinase domain profile. 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1797 653 MobiDBLite consensus disorder prediction 615 632 - -
Gso6g1797 653 PANTHER OS05G0588300 PROTEIN 12 633 - -
Gso6g1797 653 CDD STKc_IRAK 352 614 - -
Gso6g1797 653 Pfam Leucine rich repeat 84 131 IPR001611 GO:0005515
Gso6g1797 653 Pfam Protein kinase domain 349 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1797 653 Gene3D Phosphorylase Kinase; domain 1 314 420 - -
Gso6g1797 653 PANTHER OS05G0480400 PROTEIN 12 633 - -
Gso6g1797 653 MobiDBLite consensus disorder prediction 633 653 - -
Gso6g1797 653 Gene3D Transferase(Phosphotransferase) domain 1 421 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1797 Gso-Chr6 21096316 21100699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1797 26 638 Receptor kinase-like Gene Family AT5G58300 53.994 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso6g1797 Pkinase 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1797 - - gmx:100784259 1179.08